RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 POLR2JP52435 117 aaKnown RBP16.16■□□□□ 0.18
CUX1-213ENST00000549414 AQP4P55087 323 aa16.16■□□□□ 0.18
CUX1-213ENST00000549414 ACTR3P61158 418 aa16.16■□□□□ 0.18
CUX1-213ENST00000549414 ZNF598Q86UK7 904 aaKnown RBP16.16■□□□□ 0.18
CUX1-213ENST00000549414 ANKRD46Q86W74 232 aa16.16■□□□□ 0.18
CUX1-213ENST00000549414 ABCB8Q9NUT2 735 aa16.16■□□□□ 0.18
CUX1-213ENST00000549414 RFXANKO14593 260 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 SLC9A3R1O14745 358 aaPredicted RBP16.15■□□□□ 0.18
CUX1-213ENST00000549414 NPHS1O60500 1241 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 FGF3P11487 239 aaPredicted RBP16.15■□□□□ 0.18
CUX1-213ENST00000549414 RPIAP49247 311 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 TP53BP2Q13625 1128 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 UBXN11Q5T124 520 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 FAM124AQ86V42 546 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 LRRTM3Q86VH5 581 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 ZFRQ96KR1 1074 aaKnown RBP16.15■□□□□ 0.18
CUX1-213ENST00000549414 WRAP53Q9BUR4 548 aaKnown RBP16.15■□□□□ 0.18
CUX1-213ENST00000549414 STK39Q9UEW8 545 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 A0A087WXM4 84 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 CDK14O94921 469 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 IDH2P48735 452 aaKnown RBP16.15■□□□□ 0.18
CUX1-213ENST00000549414 CERS6Q6ZMG9 384 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 GET4Q7L5D6 327 aaPredicted RBP16.15■□□□□ 0.18
CUX1-213ENST00000549414 ZBTB2Q8N680 514 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 BPIFB6Q8NFQ5 453 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 EBF2Q9HAK2 575 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 A0A1W2PQ67 120 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 CDC7O00311 574 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 GABRDO14764 452 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 RGS5O15539 181 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 FAM163BP0C2L3 166 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 GGT5P36269 586 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 CREB5Q02930 508 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 ZNF549Q6P9A3 640 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 OR2T12Q8NG77 320 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 LRTOMTQ8WZ04 291 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 OXCT2Q9BYC2 517 aaPredicted RBP16.15■□□□□ 0.18
CUX1-213ENST00000549414 MIR1-1HGQ9H1L0 117 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 ASF1AQ9Y294 204 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 PCDHB1Q9Y5F3 818 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 COPG1Q9Y678 874 aaKnown RBP16.15■□□□□ 0.18
CUX1-213ENST00000549414 CST1P01037 141 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 RRM2P31350 389 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 GNPDA1P46926 289 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 LYSMD3Q7Z3D4 306 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 DSG4Q86SJ6 1040 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 TTC9BQ8N6N2 239 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 ZNF366Q8N895 744 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 UNC93B1Q9H1C4 597 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 EBF3Q9H4W6 596 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 AHSPQ9NZD4 102 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 ITM2BQ9Y287 266 aa16.15■□□□□ 0.18
CUX1-213ENST00000549414 SCN9AQ15858 1988 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 ANKDD1BA6NHY2 528 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 UNCXA6NJT0 531 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 FAM20BO75063 409 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 MTX2O75431 263 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 RECQL5O94762 991 aaPredicted RBP16.14■□□□□ 0.17
CUX1-213ENST00000549414 IL4RP24394 825 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 LIPEQ05469 1076 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 BNIP2Q12982 314 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 PLA2G4EQ3MJ16 856 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 TMC5Q6UXY8 1006 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 C3orf58Q8NDZ4 430 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 FBRSL1Q9HCM7 1045 aaKnown RBP16.14■□□□□ 0.17
CUX1-213ENST00000549414 GALPQ9UBC7 116 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 KCNE2Q9Y6J6 123 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 SLC28A1O00337 649 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 LYNP07948 512 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 ITGAXP20702 1163 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 GPR17Q13304 367 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 NAE1Q13564 534 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 DPYSQ14117 519 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 GSTA3Q16772 222 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 GLYATQ6IB77 296 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 RBM44Q6ZP01 1051 aaKnown RBP16.14■□□□□ 0.17
CUX1-213ENST00000549414 PARP8Q8N3A8 854 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 CXorf40AQ8TE69 158 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 PYCR2Q96C36 320 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 MS4A4AQ96JQ5 239 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 C8orf48Q96LL4 319 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 KIFC1Q9BW19 673 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 LRTM1Q9HBL6 345 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 CACNA2D2Q9NY47 1150 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 MOCS1Q9NZB8 636 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 CORO1CQ9ULV4 474 aaPredicted RBP16.14■□□□□ 0.17
CUX1-213ENST00000549414 SCN7AQ01118 1682 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 MAST2Q6P0Q8 1798 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 GJB5O95377 273 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 FTH1P02794 183 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 HPCAL1P37235 193 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 C16orf72Q14CZ0 275 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 TAF1AQ15573 450 aaPredicted RBP16.14■□□□□ 0.17
CUX1-213ENST00000549414 TRIM60Q495X7 471 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 BBS7Q8IWZ6 715 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 IGSF8Q969P0 613 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 PAIP1Q9H074 479 aaKnown RBP16.14■□□□□ 0.17
CUX1-213ENST00000549414 REEP1Q9H902 201 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 POLR1BQ9H9Y6 1135 aa16.14■□□□□ 0.17
CUX1-213ENST00000549414 ADPRHL2Q9NX46 363 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms