RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 TM9SF3Q9HD45 589 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 SLC2A6Q9UGQ3 507 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 SLC24A2Q9UI40 661 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 CD84Q9UIB8 345 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 GMEB2Q9UKD1 530 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 FBXO5Q9UKT4 447 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 GPR34Q9UPC5 381 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 INVSQ9Y283 1065 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 FNDC3AQ9Y2H6 1198 aaKnown RBP9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 KCTD3Q9Y597 815 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 CACNA1EQ15878 2313 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 PLXNB3Q9ULL4 1909 aa9.68□□□□□ -0.86
SMARCD1-206ENST00000549274 CACNA1HO95180 2353 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 GON4LQ3T8J9 2241 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 IGLV3-16A0A075B6K0 115 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 EXOC1LA0A1B0GW35 172 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 CCDC78A2IDD5 438 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 FAM159BA6NKW6 160 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 GAPDHSO14556 408 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 LRP3O75074 770 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 BANF1O75531 89 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 KRT38O76015 456 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 CDK14O94921 469 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 EPN2O95208 641 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 ASMTLO95671 621 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 SYPP08247 313 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 NUDT17P0C025 328 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 THEGLP0DJG4 465 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 MYBL2P10244 700 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 ATP1B2P14415 290 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 RPS3P23396 243 aaKnown RBP eCLIP9.67□□□□□ -0.863e-6■■■□□ 16.9
SMARCD1-206ENST00000549274 SPRP35270 261 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 LEPRP48357 1165 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 CD151P48509 253 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 PLOD1Q02809 727 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 IFFO1Q0D2I5 559 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 PTPRRQ15256 657 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 RASA2Q15283 850 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 BCL7AQ4VC05 210 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 HP1BP3Q5SSJ5 553 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 GPRC6AQ5T6X5 926 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 TEDDM1Q5T9Z0 273 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 GRTP1Q5TC63 336 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 CES3Q6UWW8 571 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 GCNT7Q6ZNI0 430 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 Q6ZSR6 202 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 PARGQ86W56 976 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 IGDCC3Q8IVU1 814 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 CTAGE3PQ8IX95 158 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 AGGF1Q8N302 714 aaeCLIP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 OR56A4Q8NGH8 313 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 FBF1Q8TES7 1133 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 SLC39A7Q92504 469 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 MTBPQ96DY7 904 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 TSPAN17Q96FV3 270 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 POM121Q96HA1 1249 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 VPS39Q96JC1 886 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 RUFY1Q96T51 708 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 NUSAP1Q9BXS6 441 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 ROPN1BQ9BZX4 212 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 ERVMER34-1Q9H9K5 563 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 ROPN1Q9HAT0 212 aaPredicted RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 IARS2Q9NSE4 1012 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 KLHL42Q9P2K6 505 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 KLQ9UEF7 1012 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 ZNF180Q9UJW8 692 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 PILRBQ9UKJ0 227 aa9.67□□□□□ -0.86
SMARCD1-206ENST00000549274 RALGAPA1Q6GYQ0 2036 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 SPTY2D1-AS1A0A0U1RR47 76 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 UBA6A0AVT1 1052 aaPredicted RBP9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 FADS2P1A8MWK0 482 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 E5RI56 91 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 TLR4O00206 839 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 KMOO15229 486 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 TCEA3O75764 348 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 KRT37O76014 449 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 RASGRP1O95267 797 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 SOD1P00441 154 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 TNFP01375 233 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 RETP07949 1114 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 FAM153BP0C7A2 387 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 ERVK-10P10266 1014 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 CD9P21926 228 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 ARNTP27540 789 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 ATP5DP30049 168 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 SKIV2L2P42285 1042 aaKnown RBP9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 SLC1A2P43004 574 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 MSH2P43246 934 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 MAPK9P45984 424 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 SLC12A2P55011 1212 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 GPX6P59796 221 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 HNRNPKP61978 463 aaKnown RBP eCLIP9.66□□□□□ -0.863e-8■■■■□ 21.7
SMARCD1-206ENST00000549274 TMEM115Q12893 351 aaPredicted RBP9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 DNAJC3Q13217 504 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 LRP8Q14114 963 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 PDE1CQ14123 709 aaPredicted RBP9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 SLC29A2Q14542 456 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 TMED2Q15363 201 aa9.66□□□□□ -0.86
SMARCD1-206ENST00000549274 KCTD19Q17RG1 926 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms