RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 STK32CQ86UX6 486 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 RALGPS2Q86X27 583 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 RIMKLAQ8IXN7 391 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 GABPB2Q8TAK5 448 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 FKBP10Q96AY3 582 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 SH3YL1Q96HL8 342 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 SENP8Q96LD8 212 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 ZNF347Q96SE7 839 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 MPP6Q9NZW5 540 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 FAM32AQ9Y421 112 aaKnown RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 DOCK3Q8IZD9 2030 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 CCDC154A6NI56 674 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 KPNA4O00629 521 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 SLC7A4O43246 635 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 MSI1O43347 362 aaKnown RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 BCAS1O75363 584 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 PAGE1O75459 146 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 HTR1BP28222 390 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 CD86P42081 329 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 RAD23AP54725 363 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 PRAMEF19Q5SWL8 479 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 CRTC3Q6UUV7 619 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 TMEM199Q8N511 208 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 NSMCE2Q96MF7 247 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 MFSD1Q9H3U5 465 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 TOR3AQ9H497 397 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 NT5MQ9NPB1 228 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 EVLQ9UI08 416 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 IPPQ9Y573 584 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 PCDHGA8Q9Y5G5 932 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 CLDN25C9JDP6 229 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 CRCPO75575 148 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 CNTN5O94779 1100 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 MMP3P08254 477 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 CDH1P12830 882 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 ZNF37AP17032 561 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 HTR1EP28566 365 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 PRDX3P30048 256 aaKnown RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 HPCAL1P37235 193 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 IST1P53990 364 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 CLCQ05315 142 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 ITKQ08881 620 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 LCP2Q13094 533 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 SKIV2LQ15477 1246 aaKnown RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 TAF1CQ15572 869 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 MORN1Q5T089 497 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 ARTNQ5T4W7 220 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 IQSEC1Q6DN90 963 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 GLYATQ6IB77 296 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 OR6J1Q8NGC5 347 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 PPP1R2P1Q96PQ5 205 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 ATOH8Q96SQ7 321 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 CYP2S1Q96SQ9 504 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 CORO1BQ9BR76 489 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 MROQ9BYG7 248 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 ARNT2Q9HBZ2 717 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 ATP13A1Q9HD20 1204 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 ATAD3AQ9NVI7 634 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 GIN1Q9NXP7 522 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 LEF1Q9UJU2 399 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 TOR1BO14657 336 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 AQP9O43315 295 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 HOXD8P13378 290 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 IL12AP29459 219 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 CCR1P32246 355 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 PTPRCAPQ14761 206 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 CRY1Q16526 586 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 MEP1AQ16819 746 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 DPY19L1Q2PZI1 675 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 TIGD7Q6NT04 549 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 SLC2A7Q6PXP3 512 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 GALNT7Q86SF2 657 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 SAPCD2Q86UD0 394 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 C8orf59Q8N0T1 100 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 DTWD1Q8N5C7 304 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 MAGED4Q96JG8 741 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 FCRL2Q96LA5 508 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 KLHL5Q96PQ7 755 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 SLC25A51Q9H1U9 297 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 CATSPERBQ9H7T0 1116 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 HPS4Q9NQG7 708 aa13.62□□□□□ -0.23
HDAC7-228ENST00000548938 KIAA1522Q9P206 1035 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-228ENST00000548938 MIA3Q5JRA6 1907 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 MANSC4A6NHS7 340 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 SUPT3HB4E1H0 165 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 CNOT3O75175 753 aaKnown RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 DEAF1O75398 565 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 SLC22A3O75751 556 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 MOCS2O96007 188 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 PRR35P0CG20 571 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 PIGAP37287 484 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 POLR2JP52435 117 aaKnown RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 DSC2Q02487 901 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 MAP2K5Q13163 448 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 SELPLGQ14242 412 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 ZNF846Q147U1 533 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 CTU2Q2VPK5 515 aaKnown RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 RBM48Q5RL73 367 aaKnown RBP13.61□□□□□ -0.23
HDAC7-228ENST00000548938 MANEALQ5VSG8 457 aa13.61□□□□□ -0.23
HDAC7-228ENST00000548938 TAF2Q6P1X5 1199 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms