RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PTGR1Q14914 329 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 SV2CQ496J9 727 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 CASP10Q92851 521 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 TMBIM1Q969X1 311 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 HMCESQ96FZ2 354 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 HSFY1Q96LI6 401 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 RANBP9Q96S59 729 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 HEPHQ9BQS7 1158 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 IGSF5Q9NSI5 407 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 BAG5Q9UL15 447 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 POLR3HQ9Y535 204 aaPredicted RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 ZFC3H1O60293 1989 aaKnown RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 SLCO1B7G3V0H7 640 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 NIPSNAP2O75323 286 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 DAB1O75553 588 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 CYP7B1O75881 506 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 HSPA1AP0DMV8 641 aaKnown RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 HSPA1BP0DMV9 641 aaKnown RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 IRF1P10914 325 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 SLC6A2P23975 617 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 SERPINH1P50454 418 aaKnown RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 TNK2Q07912 1038 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 TP53BP2Q13625 1128 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 ENPP6Q6UWR7 440 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 NCCRP1Q6ZVX7 275 aaPredicted RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 OR52B6Q8NGF0 335 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 FAM210AQ96ND0 272 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 C9orf16Q9BUW7 83 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 POLG2Q9UHN1 485 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 SLC30A1Q9Y6M5 507 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 ADAM23O75077 832 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 ANXA9O76027 345 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 ALDH1A1P00352 501 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 GOT2P00505 430 aaKnown RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 CST1P01037 141 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 POU4F1Q01851 419 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 EPS8Q12929 822 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 SPCS2Q15005 226 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 MARC1Q5VT66 337 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 GDF6Q6KF10 455 aaPredicted RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 KIAA2013Q8IYS2 634 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 MICU2Q8IYU8 434 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 CLIP4Q8N3C7 705 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 METTL6Q8TCB7 284 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 UBE2FQ969M7 185 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 BIRC7Q96CA5 298 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 CCDC28BQ9BUN5 200 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 KATNAL1Q9BW62 490 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 AGO3Q9H9G7 860 aaKnown RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 TMLHEQ9NVH6 421 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 ZNF451Q9Y4E5 1061 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 ASB1Q9Y576 335 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 ANGPTL3Q9Y5C1 460 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 SNX8Q9Y5X2 465 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 NDUFS3O75489 264 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 S100BP04271 92 aaPredicted RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 PBX3P40426 434 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 KPNA2P52292 529 aaKnown RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 TWF1Q12792 350 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 ZNF235Q14590 738 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 SMN1Q16637 294 aaKnown RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 UNC50Q53HI1 259 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 ALFQ53S48 1182 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 FRA10AC1Q70Z53 315 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 LINC00523Q86TU6 105 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 ZCCHC7Q8N3Z6 543 aaKnown RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 SIDT2Q8NBJ9 832 aaKnown RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 ZMIZ2Q8NF64 920 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 RPL3LQ92901 407 aaKnown RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 GPR21Q99679 349 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 TRMT13Q9NUP7 481 aaKnown RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 MIOSQ9NXC5 875 aa14.55□□□□□ -0.08
HOXC11-202ENST00000546378 SUCOQ9UBS9 1254 aaKnown RBP14.55□□□□□ -0.08
HOXC11-202ENST00000546378 PSMD11O00231 422 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 NBNO60934 754 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 DBTP11182 482 aaKnown RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 LBPP18428 481 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 CA8P35219 290 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 ACVRL1P37023 503 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 PTPRNQ16849 979 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 TECRLQ5HYJ1 363 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 LINGO4Q6UY18 593 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 NANOGNBQ7Z5D8 188 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 LGI2Q8N0V4 545 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 TBC1D15Q8TC07 691 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 SNX19Q92543 992 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 MRGPRX2Q96LB1 330 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 IL12RB2Q99665 862 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 ADAMTS10Q9H324 1103 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 RAD21L1Q9H4I0 556 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 CREBZFQ9NS37 354 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 PCDHGC4Q9Y5F7 938 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 SMIM30A4D0T7 59 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 GPR32O75388 356 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 GLP2RO95838 553 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 C1RP00736 705 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 ITGB1P05556 798 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 ATP5BP06576 529 aaKnown RBP14.54□□□□□ -0.08
HOXC11-202ENST00000546378 SLC2A3P11169 496 aa14.54□□□□□ -0.08
HOXC11-202ENST00000546378 MYCLP1P12525 358 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms