RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 TP53TG5Q9Y2B4 290 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 LUC7L2Q9Y383 392 aaKnown RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 DAAM1Q9Y4D1 1078 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 LOXL2Q9Y4K0 774 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 KCTD3Q9Y597 815 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 PCDHB4Q9Y5E5 795 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 POLEQ07864 2286 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 ZGRF1Q86YA3 2104 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 EDDM13A0A1B0GTR0 161 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 TCRBV5S2A0A599 114 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 DBX1A6NMT0 343 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 SLC31A1O15431 190 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 SLC7A4O43246 635 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 AQP9O43315 295 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 MSI1O43347 362 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 DUX1O43812 170 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 RNASEH1O60930 286 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 CSF2P04141 144 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 GYPCP04921 128 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ATP5BP06576 529 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 FAM200BP0CF97 657 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 LIFP15018 202 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 POLR2EP19388 210 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ADORA2BP29275 332 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 HNRNPH3P31942 346 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 LSP1P33241 339 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 HOXD13P35453 343 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 MDH1P40925 334 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 CCNG1P51959 295 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 NDST1P52848 882 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ADKP55263 362 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 EIF3BP55884 814 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 LINC00310P59036 64 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 KIF5AQ12840 1032 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 CNTN1Q12860 1018 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 KLRB1Q12918 225 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 CUL1Q13616 776 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 CUL4BQ13620 913 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 FGL2Q14314 439 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ELAVL3Q14576 367 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ZNF385BQ569K4 471 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 FSCBQ5H9T9 825 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 PIP5KL1Q5T9C9 394 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 AGBL2Q5U5Z8 902 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 NAA35Q5VZE5 725 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 RFWD3Q6PCD5 774 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ETV3LQ6ZN32 361 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 DSG4Q86SJ6 1040 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ZC3H18Q86VM9 953 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 KRTAP1-3Q8IUG1 177 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 TRIM48Q8IWZ4 208 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 CCDC13Q8IYE1 715 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 IQCKQ8N0W5 287 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 KDM1BQ8NB78 822 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ITFG2Q969R8 447 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 DNAJC19Q96DA6 116 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 DTNBP1Q96EV8 351 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 FAXDC2Q96IV6 333 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 CDK5RAP3Q96JB5 506 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 TNIP3Q96KP6 325 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ACCSQ96QU6 501 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 YIPF4Q9BSR8 244 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 THAP9Q9H5L6 903 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 SYNDIG1Q9H7V2 258 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 CATSPERZQ9NTU4 200 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 MYOTQ9UBF9 498 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 SNX12Q9UMY4 172 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 RPL26L1Q9UNX3 145 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ZFR2Q9UPR6 939 aaKnown RBP6.7□□□□□ -1.34
CCDC60-205ENST00000546345 ERVW-1Q9UQF0 538 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 CSNK1G3Q9Y6M4 447 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 DCHS2Q6V1P9 2916 aa6.7□□□□□ -1.34
CCDC60-205ENST00000546345 MDC1Q14676 2089 aaKnown RBP6.69□□□□□ -1.34
CCDC60-205ENST00000546345 SPTY2D1-AS1A0A0U1RR47 76 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 POM121BA6NF01 834 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 NEMP2A6NFY4 417 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 RAD51BO15315 384 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 AHCYL1O43865 530 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 GCATO75600 419 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 GCNT3O95395 438 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 LCA5LO95447 670 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 VNN1O95497 513 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 LDLRP01130 860 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 IL1BP01584 269 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 IGLV3-27P01718 113 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 ASLP04424 464 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 KRT18P05783 430 aaKnown RBP6.69□□□□□ -1.34
CCDC60-205ENST00000546345 SETSIPP0DME0 302 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 NUMBP49757 651 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 HNRNPKP61978 463 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC60-205ENST00000546345 ZBED6P86452 979 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 EIF2B5Q13144 721 aaKnown RBP6.69□□□□□ -1.34
CCDC60-205ENST00000546345 PNOCQ13519 176 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 ITIH4Q14624 930 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 SSPNQ14714 243 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 SPA17Q15506 151 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 TCEA2Q15560 299 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 BMT2Q1RMZ1 405 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 COBLL1Q53SF7 1204 aa6.69□□□□□ -1.34
CCDC60-205ENST00000546345 PITRM1Q5JRX3 1037 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms