RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 RSL1D1O76021 490 aaKnown RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 WISP3O95389 354 aaPredicted RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 PARNO95453 639 aaKnown RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 B3GALT4O96024 378 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 VARSP26640 1264 aaKnown RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 CCND3P30281 292 aaPredicted RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 GKP32189 559 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 TWF1Q12792 350 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 LCP2Q13094 533 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 INPP5AQ14642 412 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 RNF19BQ6ZMZ0 732 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 ATP6V0D2Q8N8Y2 350 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 FBXO30Q8TB52 745 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 STAG3L4Q8TBR4 150 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 BRSK1Q8TDC3 778 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 BTN2A3PQ96KV6 586 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 ZFP14Q9HCL3 533 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 SDR39U1Q9NRG7 319 aaPredicted RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 AGPAT4Q9NRZ5 378 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 TAS2R13Q9NYV9 303 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 PHF24Q9UPV7 400 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 GPR45Q9Y5Y3 372 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 U3KQV3 271 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 GOLGA4Q13439 2230 aaKnown RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 NOBOXO60393 691 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 TCF3P15923 654 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 HOXC8P31273 242 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 POLR2IP36954 125 aaKnown RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 MGAT3Q09327 533 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 SLC14A2Q15849 920 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 LDLRAP1Q5SW96 308 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 KANK2Q63ZY3 851 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 KLHL35Q6PF15 583 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 IL27RAQ6UWB1 636 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 PRSS55Q6UWB4 352 aaPredicted RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 GLB1LQ6UWU2 654 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 MRPL10Q7Z7H8 261 aaKnown RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 TMEM173Q86WV6 379 aaPredicted RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 CAMK1DQ8IU85 385 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 ISOC1Q96CN7 298 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 ANKRD60Q9BZ19 345 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 RRAGCQ9HB90 399 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 ACOX3O15254 700 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 SNX2O60749 519 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 KCNH1O95259 989 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 CAPNS1P04632 268 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 G6PDP11413 515 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 BMP2P12643 396 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 PRKACGP22612 351 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 MC4RP32245 332 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 CA5AP35218 305 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 EMP3P54852 163 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 RPL26P61254 145 aaKnown RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 LAPTM4AQ15012 233 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 TAS1R1Q7RTX1 841 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 TMEM126BQ8IUX1 230 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 SLC22A15Q8IZD6 547 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 DRAXINQ8NBI3 349 aaPredicted RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 WBP2Q969T9 261 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 BIRC7Q96CA5 298 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 FAM193BQ96PV7 902 aaPredicted RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 TSPAN18Q96SJ8 248 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 CHID1Q9BWS9 393 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 APOL5Q9BWW9 433 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 TLR9Q9NR96 1032 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 FARSBQ9NSD9 589 aaKnown RBP14.91□□□□□ -0.02
USP28-214ENST00000545540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.91□□□□□ -0.02
USP28-214ENST00000545540 LMCD1Q9NZU5 365 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 SCML2Q9UQR0 700 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 SQORQ9Y6N5 450 aa14.91□□□□□ -0.02
USP28-214ENST00000545540 BNIP3LO60238 219 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 DUSP11O75319 330 aaKnown RBP14.9□□□□□ -0.02
USP28-214ENST00000545540 SLC22A3O75751 556 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 PSMD8P48556 350 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 PTGR1Q14914 329 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 KCTD21Q4G0X4 260 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 LETMD1Q6P1Q0 360 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 DUS1LQ6P1R4 473 aaKnown RBP14.9□□□□□ -0.02
USP28-214ENST00000545540 ITIH5Q86UX2 942 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 EGFL6Q8IUX8 553 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 FIG4Q92562 907 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 MUS81Q96NY9 551 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 ADNPQ9H2P0 1102 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 CXorf21Q9HAI6 301 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 MRPL40Q9NQ50 206 aaKnown RBP14.9□□□□□ -0.02
USP28-214ENST00000545540 PCDHA9Q9Y5H5 950 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 E5RI56 91 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 CAPN1P07384 714 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 ALPIP09923 528 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 TACR2P21452 398 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 ACADVLP49748 655 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 ERVPABLB-1P60509 514 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 RAD51Q06609 339 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 FOXD4Q12950 439 aaPredicted RBP14.9□□□□□ -0.02
USP28-214ENST00000545540 BNIP3Q12983 259 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 DCP1BQ8IZD4 617 aaKnown RBP14.9□□□□□ -0.02
USP28-214ENST00000545540 ANKFN1Q8N957 763 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 C1orf74Q96LT6 269 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 TRMOQ9BU70 441 aa14.9□□□□□ -0.02
USP28-214ENST00000545540 TM6SF2Q9BZW4 377 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms