RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 FADS2P1A8MWK0 482 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 GPR89AB7ZAQ6 455 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 SNX2O60749 519 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 DPM1O60762 260 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 LRCH4O75427 683 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 GPR89BP0CG08 455 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 TYRP1P17643 537 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 DESP17661 470 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 MIPP30301 263 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 CASP14P31944 242 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 MMP13P45452 471 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 PPM1FP49593 454 aaPredicted RBP14.5□□□□□ -0.09
RTN3-214ENST00000545432 SEPHS1P49903 392 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 CCL11P51671 97 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 CDH6P55285 790 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 RIPPLY3P57055 190 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 CAMK4Q16566 473 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 HSP90AA4PQ58FG1 418 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 MARC1Q5VT66 337 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 PWWP2BQ6NUJ5 590 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 WASH2PQ6VEQ5 465 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 LRRC49Q8IUZ0 686 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 RBM12BQ8IXT5 1001 aaKnown RBP14.5□□□□□ -0.09
RTN3-214ENST00000545432 RBMXL3Q8N7X1 1067 aaKnown RBP14.5□□□□□ -0.09
RTN3-214ENST00000545432 GLIS1Q8NBF1 620 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 PNPLA2Q96AD5 504 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 TGM7Q96PF1 710 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 SLC29A3Q9BZD2 475 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 SLC40A1Q9NP59 571 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 WASH6PQ9NQA3 447 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 POT1Q9NUX5 634 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 PCSK1NQ9UHG2 260 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 FARSAQ9Y285 508 aaKnown RBP14.5□□□□□ -0.09
RTN3-214ENST00000545432 CRYBG3Q68DQ2 2970 aa14.5□□□□□ -0.09
RTN3-214ENST00000545432 POLQO75417 2590 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 SSU72P8A0A1W2PR75 194 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 CLDN7O95471 211 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 BRAFP15056 766 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 AMD1P17707 334 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 CES1P23141 567 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 PSMA2P25787 234 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 CAPZBP47756 277 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 SPINT3P49223 89 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 RPL26P61254 145 aaKnown RBP14.49□□□□□ -0.09
RTN3-214ENST00000545432 IL10RAQ13651 578 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 DPYSL2Q16555 572 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 PPP6R3Q5H9R7 873 aaPredicted RBP14.49□□□□□ -0.09
RTN3-214ENST00000545432 CRB2Q5IJ48 1285 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 CACHD1Q5VU97 1274 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 IZUMO3Q5VZ72 239 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 SLC6A19Q695T7 634 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 POLNQ7Z5Q5 900 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 PHYKPLQ8IUZ5 450 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 PRR7Q8TB68 274 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 RSC1A1Q92681 617 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 RNF31Q96EP0 1072 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 ZDHHC12Q96GR4 267 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 SMAD5Q99717 465 aaKnown RBP14.49□□□□□ -0.09
RTN3-214ENST00000545432 FAM83DQ9H4H8 585 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 PDE7BQ9NP56 450 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 ACSS2Q9NR19 701 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 PARVAQ9NVD7 372 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 ATXN10Q9UBB4 475 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 SLC23A2Q9UGH3 650 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 RPL26L1Q9UNX3 145 aaKnown RBP14.49□□□□□ -0.09
RTN3-214ENST00000545432 SLC5A6Q9Y289 635 aa14.49□□□□□ -0.09
RTN3-214ENST00000545432 PES1O00541 588 aaKnown RBP14.48□□□□□ -0.09
RTN3-214ENST00000545432 VIPP01282 170 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 FOLR1P15328 257 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 ZNF8P17098 575 aaPredicted RBP14.48□□□□□ -0.09
RTN3-214ENST00000545432 AMPD1P23109 780 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 CHAF1BQ13112 559 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 DPCR1Q3MIW9 517 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 AGAP9Q5VTM2 703 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 FAM199XQ6PEV8 388 aaPredicted RBP14.48□□□□□ -0.09
RTN3-214ENST00000545432 RHOT1Q8IXI2 618 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 UBXN4Q92575 508 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 MAML1Q92585 1016 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 FATE1Q969F0 183 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 ELMO2Q96JJ3 720 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 LRFN5Q96NI6 719 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 TDRD1Q9BXT4 1180 aaKnown RBP14.48□□□□□ -0.09
RTN3-214ENST00000545432 ZWILCHQ9H900 591 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 TRIM39Q9HCM9 518 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 KLC4Q9NSK0 619 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 AMACRQ9UHK6 382 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 FBN2P35556 2912 aa14.48□□□□□ -0.09
RTN3-214ENST00000545432 PRRC2CQ9Y520 2896 aaKnown RBP14.48□□□□□ -0.09
RTN3-214ENST00000545432 ARGFXA6NJG6 315 aa14.47□□□□□ -0.09
RTN3-214ENST00000545432 PRPSAP2O60256 369 aa14.47□□□□□ -0.09
RTN3-214ENST00000545432 RNF8O76064 485 aa14.47□□□□□ -0.09
RTN3-214ENST00000545432 JCHAINP01591 159 aa14.47□□□□□ -0.09
RTN3-214ENST00000545432 IL1R2P27930 398 aa14.47□□□□□ -0.09
RTN3-214ENST00000545432 PCK1P35558 622 aa14.47□□□□□ -0.09
RTN3-214ENST00000545432 RPS18P62269 152 aaKnown RBP14.47□□□□□ -0.09
RTN3-214ENST00000545432 RPS15P62841 145 aaKnown RBP14.47□□□□□ -0.09
RTN3-214ENST00000545432 CDKAL1Q5VV42 579 aa14.47□□□□□ -0.09
RTN3-214ENST00000545432 PPP1R2P3Q6NXS1 205 aa14.47□□□□□ -0.09
RTN3-214ENST00000545432 TMCO3Q6UWJ1 677 aa14.47□□□□□ -0.09
RTN3-214ENST00000545432 ADGRG6Q86SQ4 1221 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms