RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 LRRTM4Q86VH4 590 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 KLHDC8BQ8IXV7 354 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 TTC30BQ8N4P2 665 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 FAM71DQ8N9W8 422 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 GDAP1Q8TB36 358 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 SLC35B2Q8TB61 432 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 CCDC110Q8TBZ0 833 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 CCDC97Q96F63 343 aaPredicted RBP11.68□□□□□ -0.54
HDAC4-216ENST00000544989 ZNF514Q96K75 400 aaPredicted RBP11.68□□□□□ -0.54
HDAC4-216ENST00000544989 TBL1YQ9BQ87 522 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 TIMM29Q9BSF4 260 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.68□□□□□ -0.54
HDAC4-216ENST00000544989 LRRC40Q9H9A6 602 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 ARNT2Q9HBZ2 717 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 ATXN10Q9UBB4 475 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 ZKSCAN5Q9Y2L8 839 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 RAXQ9Y2V3 346 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 PCDHB1Q9Y5F3 818 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 SPO11Q9Y5K1 396 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 ENTPD2Q9Y5L3 495 aa11.68□□□□□ -0.54
HDAC4-216ENST00000544989 OAS3Q9Y6K5 1087 aaKnown RBP11.68□□□□□ -0.54
HDAC4-216ENST00000544989 A0A087WV48 116 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 GLYATL1P3A0A0U1RQE8 302 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 AURKAO14965 403 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 CDK14O94921 469 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 CPNE6O95741 557 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 AGTP01019 485 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 ZNF8P17098 575 aaPredicted RBP11.67□□□□□ -0.54
HDAC4-216ENST00000544989 HADHAP40939 763 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 CHRNA4P43681 627 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 MAZP56270 477 aaKnown RBP11.67□□□□□ -0.54
HDAC4-216ENST00000544989 PCBP4P57723 403 aaKnown RBP11.67□□□□□ -0.54
HDAC4-216ENST00000544989 SQSTM1Q13501 440 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 LAMB3Q13751 1172 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 MEI1Q5TIA1 1274 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 AADACL2Q6P093 401 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 ADGRG6Q86SQ4 1221 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 LINC00523Q86TU6 105 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 PIM3Q86V86 326 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 NAGSQ8N159 534 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 SFRP1Q8N474 314 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 Q8N9G6 341 aaPredicted RBP11.67□□□□□ -0.54
HDAC4-216ENST00000544989 PTCD2Q8WV60 388 aaKnown RBP11.67□□□□□ -0.54
HDAC4-216ENST00000544989 RTP4Q96DX8 246 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 ATXN7L3BQ96GX2 97 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 EPB41L1Q9H4G0 881 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 C10orf88Q9H8K7 445 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 BPIFA1Q9NP55 256 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 SARS2Q9NP81 518 aaKnown RBP11.67□□□□□ -0.54
HDAC4-216ENST00000544989 IL26Q9NPH9 171 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 SMOXQ9NWM0 555 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 RABGEF1Q9UJ41 708 aa11.67□□□□□ -0.54
HDAC4-216ENST00000544989 DNMT3AQ9Y6K1 912 aaPredicted RBP11.67□□□□□ -0.54
HDAC4-216ENST00000544989 UNC13CQ8NB66 2214 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 A0A0U1RQJ8 604 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 A0A1W2PQM1 296 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 GOLGA6L3A6NEY3 463 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 F5H423 210 aaPredicted RBP11.66□□□□□ -0.54
HDAC4-216ENST00000544989 PLD2O14939 933 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 GAS8O95995 478 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 MPOP05164 745 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 ITGA2BP08514 1039 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 ACP5P13686 325 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 F3P13726 295 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 ZNF7P17097 686 aaPredicted RBP11.66□□□□□ -0.54
HDAC4-216ENST00000544989 ALDH4A1P30038 563 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 FDFT1P37268 417 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 B4GALNT1Q00973 533 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 TMEM115Q12893 351 aaPredicted RBP11.66□□□□□ -0.54
HDAC4-216ENST00000544989 TRA2AQ13595 282 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC4-216ENST00000544989 INSCQ1MX18 579 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 MAP9Q49MG5 647 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 ATP13A5Q4VNC0 1218 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 C3orf38Q5JPI3 329 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 IYDQ6PHW0 289 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 C4orf22Q6V702 233 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 WASH2PQ6VEQ5 465 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 SLC13A5Q86YT5 568 aaPredicted RBP11.66□□□□□ -0.54
HDAC4-216ENST00000544989 RBM12BQ8IXT5 1001 aaKnown RBP11.66□□□□□ -0.54
HDAC4-216ENST00000544989 ZNF248Q8NDW4 579 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 DDHD1Q8NEL9 900 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 OR10G6Q8NH81 332 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 HEXDCQ8WVB3 486 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 ANP32BQ92688 251 aaKnown RBP11.66□□□□□ -0.54
HDAC4-216ENST00000544989 ULK4Q96C45 1275 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 AHCYL2Q96HN2 611 aaKnown RBP11.66□□□□□ -0.54
HDAC4-216ENST00000544989 SLC46A1Q96NT5 459 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 SLC38A3Q99624 504 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 CMKLR1Q99788 373 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 FAM118BQ9BPY3 351 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 GORASP1Q9BQQ3 440 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 TMEM121Q9BTD3 319 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 LZTFL1Q9NQ48 299 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 WASH6PQ9NQA3 447 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 HOMER3Q9NSC5 361 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 KCNK4Q9NYG8 393 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 SATB2Q9UPW6 733 aa11.66□□□□□ -0.54
HDAC4-216ENST00000544989 HGSO14964 777 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-216ENST00000544989 LIASO43766 372 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms