RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 OR2T12Q8NG77 320 aa13.14□□□□□ -0.31
PCMTD1-208ENST00000544451 AURKBQ96GD4 344 aaPredicted RBP13.14□□□□□ -0.31
PCMTD1-208ENST00000544451 C1QTNF1Q9BXJ1 281 aa13.14□□□□□ -0.31
PCMTD1-208ENST00000544451 CLPBQ9H078 707 aa13.14□□□□□ -0.31
PCMTD1-208ENST00000544451 NOL6Q9H6R4 1146 aaKnown RBP13.14□□□□□ -0.31
PCMTD1-208ENST00000544451 FKBPLQ9UIM3 349 aa13.14□□□□□ -0.31
PCMTD1-208ENST00000544451 EIF3LQ9Y262 564 aaKnown RBP13.14□□□□□ -0.31
PCMTD1-208ENST00000544451 COQ6Q9Y2Z9 468 aa13.14□□□□□ -0.31
PCMTD1-208ENST00000544451 UBFD1O14562 309 aaKnown RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 NBNO60934 754 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 XYLBO75191 536 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 STAU1O95793 577 aaKnown RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 BNIP2Q12982 314 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 LRP8Q14114 963 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 GRM2Q14416 872 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 ZBED5Q49AG3 693 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 DCP1BQ8IZD4 617 aaKnown RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 TRPV3Q8NET8 790 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 PSMA8Q8TAA3 256 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 KCTD13Q8WZ19 329 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 TRMOQ9BU70 441 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 DDX28Q9NUL7 540 aaKnown RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 PLK2Q9NYY3 685 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 PADI3Q9ULW8 664 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 GREB1LQ9C091 1923 aaPredicted RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 ATE1O95260 518 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 RHOCP08134 193 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 CDH3P22223 829 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 AIF1P55008 147 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 RPS24P62847 133 aaKnown RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 MRPS6P82932 125 aaKnown RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 ZNF177Q13360 481 aaPredicted RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 C18orf21Q32NC0 220 aaPredicted RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 SLC44A2Q8IWA5 706 aaPredicted RBP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 C2orf69Q8N8R5 385 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 HTRA1Q92743 480 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 RORBQ92753 470 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 BIRC7Q96CA5 298 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 CMTM6Q9NX76 183 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 COL1A2P08123 1366 aa13.13□□□□□ -0.31
PCMTD1-208ENST00000544451 ZNF487B1APH4 448 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 SCNN1AP37088 669 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 OR4D2P58180 307 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 ZBTB6Q15916 424 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 PAGE3Q5JUK9 113 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 DET1Q7L5Y6 550 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 P3H2Q8IVL5 708 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 KIAA2013Q8IYS2 634 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 TBC1D21Q8IYX1 336 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 PHACTR4Q8IZ21 702 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 CLDN19Q8N6F1 224 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 OR10T2Q8NGX3 314 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 SH3RF2Q8TEC5 729 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 PPP1R2P1Q96PQ5 205 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 PRDM16Q9HAZ2 1276 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 LTB4R2Q9NPC1 389 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 OLAHQ9NV23 265 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 VPS28Q9UK41 221 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 SH3GLB1Q9Y371 365 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 SQORQ9Y6N5 450 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 MYO7AQ13402 2215 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 UPK3BL1B0FP48 263 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 UPK3BL2E5RIL1 263 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 NADKO95544 446 aaPredicted RBP13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 THRBP10828 461 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 POU1F1P28069 291 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 LRRC74AQ0VAA2 488 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 FAM174BQ3ZCQ3 159 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 FBXL22Q6P050 247 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 KIAA0408Q6ZU52 694 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 SLCO6A1Q86UG4 719 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 RASAL3Q86YV0 1011 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 OR7A2PQ8NGA2 310 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 BORCS5Q969J3 196 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 GSTO2Q9H4Y5 243 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 DNAJC25-GNG10A0A024R161 153 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 A0A0D9SEW6 157 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 TRPC1P48995 793 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 PFKPQ01813 784 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 ARMC12Q5T9G4 340 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 KCTD11Q693B1 232 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 HMBOX1Q6NT76 420 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 ZNF621Q6ZSS3 439 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 CHERPQ8IWX8 916 aaKnown RBP13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 KLHL23Q8NBE8 558 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 OR52B6Q8NGF0 335 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 EEF1AKMT1Q8WVE0 214 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 HPS1Q92902 700 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 GPATCH1Q9BRR8 931 aaKnown RBP13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 UBA2Q9UBT2 640 aaPredicted RBP13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 ATP11BQ9Y2G3 1177 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 TRPV2Q9Y5S1 764 aa13.12□□□□□ -0.31
PCMTD1-208ENST00000544451 ARVCFO00192 962 aa13.11□□□□□ -0.31
PCMTD1-208ENST00000544451 XPNPEP2O43895 674 aa13.11□□□□□ -0.31
PCMTD1-208ENST00000544451 FADS2O95864 444 aaKnown RBP13.11□□□□□ -0.31
PCMTD1-208ENST00000544451 ANXA6P08133 673 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms