RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CARS2Q9HA77 564 aaKnown RBP13.49□□□□□ -0.25
SP140-213ENST00000543928 TRIM39Q9HCM9 518 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 CYP4F12Q9HCS2 524 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 TMEM9BQ9NQ34 198 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 VPS18Q9P253 973 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 ATXN10Q9UBB4 475 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 CHMP2BQ9UQN3 213 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 TEX264Q9Y6I9 313 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 TDRD6O60522 2096 aaKnown RBP13.49□□□□□ -0.25
SP140-213ENST00000543928 PLXNB3Q9ULL4 1909 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 TRBV5-4A0A0C4DH59 114 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 ZCWPW2A0A1B0GU75 182 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 SCAMP1O15126 338 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 YKT6O15498 198 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 USP1O94782 785 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 VAPBO95292 243 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 TNFP01375 233 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 FUCA1P04066 466 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 POLBP06746 335 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 IVLP07476 585 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 ARNTP27540 789 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 EPHA8P29322 1005 aaPredicted RBP13.48□□□□□ -0.25
SP140-213ENST00000543928 AKT1P31749 480 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 GNPDA1P46926 289 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 BLKP51451 505 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 HK3P52790 923 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 HNRNPKP61978 463 aaKnown RBP eCLIP13.48□□□□□ -0.25
SP140-213ENST00000543928 BNIP3Q12983 259 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 FASTKD3Q14CZ7 662 aaKnown RBP13.48□□□□□ -0.25
SP140-213ENST00000543928 SMAD1Q15797 465 aaKnown RBP13.48□□□□□ -0.25
SP140-213ENST00000543928 FASTKD1Q53R41 847 aaKnown RBP13.48□□□□□ -0.25
SP140-213ENST00000543928 ADGRG6Q86SQ4 1221 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 SERPINA9Q86WD7 417 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 ANKMY2Q8IV38 441 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 ZBED8Q8IZ13 594 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 IFT81Q8WYA0 676 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.48□□□□□ -0.25
SP140-213ENST00000543928 CFAP36Q96G28 342 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 SGSM3Q96HU1 749 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 SLC13A1Q9BZW2 595 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 SAYSD1Q9NPB0 183 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 TM7SF3Q9NS93 570 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 CATSPERZQ9NTU4 200 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 ZDHHC18Q9NUE0 388 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 DNAAF2Q9NVR5 837 aaKnown RBP13.48□□□□□ -0.25
SP140-213ENST00000543928 ZC3H7BQ9UGR2 993 aaKnown RBP13.48□□□□□ -0.25
SP140-213ENST00000543928 APOBEC3BQ9UH17 382 aaKnown RBP13.48□□□□□ -0.25
SP140-213ENST00000543928 SUFUQ9UMX1 484 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 DGKBQ9Y6T7 804 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 LRP4O75096 1905 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 PIEZO1Q92508 2521 aa13.48□□□□□ -0.25
SP140-213ENST00000543928 C4orf47A7E2U8 309 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 GOLGA8KD6RF30 607 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 GOLGA8TH3BQL2 631 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 EIF3HO15372 352 aaKnown RBP eCLIP13.47□□□□□ -0.25
SP140-213ENST00000543928 CD3EAPO15446 510 aaKnown RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 VEGFDO43915 354 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 NUAK1O60285 661 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 DNAJC6O75061 913 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 PIAS2O75928 621 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 CDK14O94921 469 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 SLU7O95391 586 aaKnown RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 TTC4O95801 387 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 ZNF883P0CG24 379 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 ZNF8P17098 575 aaPredicted RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 MSH3P20585 1137 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 ACRV1P26436 265 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 ARCN1P48444 511 aaKnown RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 TMEM115Q12893 351 aaPredicted RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 CBLBQ13191 982 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 GTF2H3Q13889 308 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 HLTFQ14527 1009 aaKnown RBP eCLIP13.47□□□□□ -0.25
SP140-213ENST00000543928 CRYMQ14894 314 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 TCEA2Q15560 299 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 DBN1Q16643 649 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 UAP1L1Q3KQV9 507 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 PRRT3Q5FWE3 981 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 SPANXN3Q5MJ09 141 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 ALYREFQ86V81 257 aaKnown RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 CCDC25Q86WR0 208 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 GATAD2AQ86YP4 633 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 CCNJLQ8IV13 435 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 IFT20Q8IY31 132 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 OTUD6BQ8N6M0 293 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 PNPLA1Q8N8W4 532 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
SP140-213ENST00000543928 FBXO36Q8NEA4 188 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 ZNF548Q8NEK5 533 aaPredicted RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 CCDC97Q96F63 343 aaPredicted RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 SCARF2Q96GP6 870 aaPredicted RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 TTC25Q96NG3 672 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 COPS8Q99627 209 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 LRRC61Q9BV99 259 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 FAM129AQ9BZQ8 928 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 FOXP3Q9BZS1 431 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 ZCCHC2Q9C0B9 1178 aaKnown RBP13.47□□□□□ -0.25
SP140-213ENST00000543928 RMI1Q9H9A7 625 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 ZDHHC3Q9NYG2 299 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 IL1RAPL1Q9NZN1 696 aa13.47□□□□□ -0.25
SP140-213ENST00000543928 MARCH4Q9P2E8 410 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms