RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PTPRCAPQ14761 206 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 ZNF542PQ5EBM4 170 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 ZRANB3Q5FWF4 1079 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 GPRC6AQ5T6X5 926 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 ZCCHC8Q6NZY4 707 aaKnown RBP18.57■□□□□ 0.56
VPS33A-205ENST00000541169 KDM7AQ6ZMT4 941 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 ADGRG6Q86SQ4 1221 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 LMNTD2Q8IXW0 634 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 FAM181AQ8N9Y4 354 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 OR4L1Q8NH43 312 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 GPBAR1Q8TDU6 330 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 COPS8Q99627 209 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 TRIM51Q9BSJ1 452 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 FOXP3Q9BZS1 431 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 ATXN10Q9UBB4 475 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 PCOLCE2Q9UKZ9 415 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 TMEM98Q9Y2Y6 226 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 CABIN1Q9Y6J0 2220 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 GOLGA8MH3BSY2 632 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 GRID2O43424 1007 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 UGT1A9O60656 530 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 POLBP06746 335 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 CDK4P11802 303 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 UGT1A6P19224 532 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 UGT1A1P22309 533 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 UGT1A4P22310 534 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 AKT1P31749 480 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 UGT1A3P35503 534 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 UGT1A5P35504 534 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 GNPDA1P46926 289 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 RPIAP49247 311 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 DUSP3P51452 185 aaPredicted RBP18.56■□□□□ 0.56
VPS33A-205ENST00000541169 CLCNKAP51800 687 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 ITGA8P53708 1063 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 TMPRSS15P98073 1019 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 IL9RQ01113 521 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 ITIH4Q14624 930 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 HIF1AQ16665 826 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 FASTKD1Q53R41 847 aaKnown RBP18.56■□□□□ 0.56
VPS33A-205ENST00000541169 DUPD1Q68J44 220 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 DOK6Q6PKX4 331 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 GLRX5Q86SX6 157 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 TMEM135Q86UB9 458 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 LRRTM4Q86VH4 590 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 GATAD2AQ86YP4 633 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 OR6P1Q8NGX9 317 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 HDAC10Q969S8 669 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 PHACTR1Q9C0D0 580 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 OR2AG1Q9H205 316 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 VPS37BQ9H9H4 285 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 UGT1A7Q9HAW7 530 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 UGT1A10Q9HAW8 530 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 UGT1A8Q9HAW9 530 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 SYBUQ9NX95 663 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 ZNHIT2Q9UHR6 403 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 VPS9D1Q9Y2B5 631 aa18.56■□□□□ 0.56
VPS33A-205ENST00000541169 MYLKQ15746 1914 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 ESPNB1AK53 854 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 TNFSF14O43557 240 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 SH3BP5O60239 455 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 SDC3O75056 442 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 AVILO75366 819 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 USP1O94782 785 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 AP2A2O94973 939 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 SLC2A4P14672 509 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 ACRV1P26436 265 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 RPL21P46778 160 aaKnown RBP18.55■□□□□ 0.56
VPS33A-205ENST00000541169 TTPAP49638 278 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 TERF1P54274 439 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 KIAA0930Q6ICG6 404 aaPredicted RBP18.55■□□□□ 0.56
VPS33A-205ENST00000541169 MRNIPQ6NTE8 343 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 PACS1Q6VY07 963 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 CEP128Q6ZU80 1094 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 TAS2R42Q7RTR8 314 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 TRIM74Q86UV6 250 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 RBFAQ8N0V3 343 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 OR6C4Q8NGE1 309 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 STAMBPL1Q96FJ0 436 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 SIGLEC10Q96LC7 697 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 TCF12Q99081 682 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 TIMM29Q9BSF4 260 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 TRIM31Q9BZY9 425 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 MRPL40Q9NQ50 206 aaKnown RBP18.55■□□□□ 0.56
VPS33A-205ENST00000541169 ZDHHC3Q9NYG2 299 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 FTSJ1Q9UET6 329 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 TMPRSS11EQ9UL52 423 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 PNMA8BQ9ULN7 279 aaPredicted RBP18.55■□□□□ 0.56
VPS33A-205ENST00000541169 GPSM3Q9Y4H4 160 aa18.55■□□□□ 0.56
VPS33A-205ENST00000541169 OAS3Q9Y6K5 1087 aaKnown RBP18.55■□□□□ 0.56
VPS33A-205ENST00000541169 ASCC3Q8N3C0 2202 aaKnown RBP18.54■□□□□ 0.56
VPS33A-205ENST00000541169 LAMA1P25391 3075 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 IGLV3-16A0A075B6K0 115 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 CCDC162PA2VCL2 907 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 EIF3HO15372 352 aaKnown RBP eCLIP18.54■□□□□ 0.56
VPS33A-205ENST00000541169 CBFA2T3O75081 653 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 ZNF8P17098 575 aaPredicted RBP18.54■□□□□ 0.56
VPS33A-205ENST00000541169 PGAM1P18669 254 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 NSG1P42857 185 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 POLD2P49005 469 aa18.54■□□□□ 0.56
VPS33A-205ENST00000541169 TUBB4BP68371 445 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms