RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	OR52I2	Q8NH67	350 aa		5.76	□□□□□ -1.49
YBX3-210	ENST00000540975	TMEM255B	Q8WV15	326 aa		5.76	□□□□□ -1.49
YBX3-210	ENST00000540975	ALG14	Q96F25	216 aa		5.76	□□□□□ -1.49
YBX3-210	ENST00000540975	MPP4	Q96JB8	637 aa		5.76	□□□□□ -1.49
YBX3-210	ENST00000540975	TMEM39B	Q9GZU3	492 aa		5.76	□□□□□ -1.49
YBX3-210	ENST00000540975	POLG2	Q9UHN1	485 aa		5.76	□□□□□ -1.49
YBX3-210	ENST00000540975	FBXW11	Q9UKB1	542 aa		5.76	□□□□□ -1.49
YBX3-210	ENST00000540975	KANSL1L	A0AUZ9	987 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	SCAMP1	O15126	338 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	EIF3D	O15371	548 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	SYNGR3	O43761	229 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	RARG	P13631	454 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	GM2A	P17900	193 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	CDH2	P19022	906 aa	Predicted RBP	5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	CHM	P24386	653 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	MAN1A1	P33908	653 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	TIMP3	P35625	211 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	PIK3CA	P42336	1068 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	GALC	P54803	685 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	LINC01547	P58512	204 aa	Predicted RBP	5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	TFAP4	Q01664	338 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	OTUD3	Q5T2D3	398 aa	Predicted RBP	5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	PLA2G4F	Q68DD2	849 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	ZNF449	Q6P9G9	518 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	TSPAN33	Q86UF1	283 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	ADSSL1	Q8N142	457 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	RASGEF1C	Q8N431	466 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	LINGO1	Q96FE5	620 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	SEMA3C	Q99985	751 aa		5.75	□□□□□ -1.49
YBX3-210	ENST00000540975	FAF1	Q9UNN5	650 aa	Predicted RBP	5.75	□□□□□ -1.49
YBX3-210	ENST00000540975		A0A087X0M5	115 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975		A0A1B0GX30	115 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	OR5K3	A6NET4	321 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	NR1D1	P20393	614 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	KRT32	Q14532	448 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	SIRPB2	Q5JXA9	342 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	PMS2CL	Q68D20	193 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	GSG1L	Q6UXU4	331 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	PLEKHM3	Q6ZWE6	761 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	EMC1	Q8N766	993 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	PAF1	Q8N7H5	531 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	C1orf74	Q96LT6	269 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	SMC6	Q96SB8	1091 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	MUC13	Q9H3R2	512 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	EPB41L5	Q9HCM4	733 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	FAM118A	Q9NWS6	357 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	HCFC1R1	Q9NWW0	138 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	CORO1C	Q9ULV4	474 aa	Predicted RBP	5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	MTMR6	Q9Y217	621 aa		5.74	□□□□□ -1.49
YBX3-210	ENST00000540975	IGLV5-45	A0A087WSX0	123 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	IGHV4-39	P01824	125 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	HIST1H2AB	P04908	130 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	LAMP2	P13473	410 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	ZNF23	P17027	643 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	HIST1H2AD	P20671	130 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	SREBF2	Q12772	1141 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	RBM39	Q14498	530 aa	Known RBP	5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	CCNYL2	Q5T2Q4	361 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975		Q75L30	129 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	HIST3H2A	Q7L7L0	130 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	HACE1	Q8IYU2	909 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	SLC38A9	Q8NBW4	561 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	HJURP	Q8NCD3	748 aa	Predicted RBP	5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	PHF21A	Q96BD5	680 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	MARCH4	Q9P2E8	410 aa	Predicted RBP	5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	KLHL9	Q9P2J3	617 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	ZNF69	Q9UC07	566 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	ERRFI1	Q9UJM3	462 aa	Predicted RBP	5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	TCF19	Q9Y242	345 aa		5.73	□□□□□ -1.49
YBX3-210	ENST00000540975	C5orf60	A6NFR6	353 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	PRSS47	A8MTI9	375 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975		H3BQ06	376 aa	Predicted RBP	5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	USO1	O60763	962 aa	Known RBP	5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	PAX1	P15863	534 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	ACADL	P28330	430 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	AHR	P35869	848 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	CDKN1A	P38936	164 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	GLIPR1	P48060	266 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	DDX10	Q13206	875 aa	Known RBP	5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	EIF4A2	Q14240	407 aa	Known RBP	5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	ZSCAN23	Q3MJ62	389 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	GKAP1	Q5VSY0	366 aa	Predicted RBP	5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	SNX30	Q5VWJ9	437 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	KLHL35	Q6PF15	583 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	SARM1	Q6SZW1	724 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	CERS3	Q8IU89	383 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	EPHX4	Q8IUS5	362 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	KLHDC8B	Q8IXV7	354 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	NGEF	Q8N5V2	710 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	POMGNT1	Q8WZA1	660 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	HDAC2	Q92769	488 aa	Known RBP	5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	SCRN2	Q96FV2	425 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	ST6GAL2	Q96JF0	529 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	NEUROD6	Q96NK8	337 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	ITPA	Q9BY32	194 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	NISCH	Q9Y2I1	1504 aa		5.72	□□□□□ -1.49
YBX3-210	ENST00000540975	FAM72C	H0Y354	149 aa		5.71	□□□□□ -1.5
YBX3-210	ENST00000540975	SMAD9	O15198	467 aa	Known RBP	5.71	□□□□□ -1.5
YBX3-210	ENST00000540975	PLPP2	O43688	288 aa		5.71	□□□□□ -1.5
YBX3-210	ENST00000540975	CTSV	O60911	334 aa		5.71	□□□□□ -1.5

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