RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 MAZP56270 477 aaKnown RBP9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CDH17Q12864 832 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 TMEM115Q12893 351 aaPredicted RBP9.12□□□□□ -0.95
SNHG1-215ENST00000540904 TARDBPQ13148 414 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNHG1-215ENST00000540904 BIRC2Q13490 618 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 PEX6Q13608 980 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 ITGA9Q13797 1035 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 GTF2H3Q13889 308 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 C14orf28Q4W4Y0 310 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CCDC38Q502W7 563 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CERCAMQ5T4B2 595 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 TTC27Q6P3X3 843 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 C4orf22Q6V702 233 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CCNI2Q6ZMN8 369 aaPredicted RBP9.12□□□□□ -0.95
SNHG1-215ENST00000540904 Q8N9G6 341 aaPredicted RBP9.12□□□□□ -0.95
SNHG1-215ENST00000540904 ZNF398Q8TD17 642 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 ACTRT1Q8TDG2 376 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 PATE1Q8WXA2 126 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CCDC74AQ96AQ1 378 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 DNAJC1Q96KC8 554 aaKnown RBP9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CNTNAP3BQ96NU0 1288 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CCDC3Q9BQI4 270 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CNTNAP3Q9BZ76 1288 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 OSGEPL1Q9H4B0 414 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 ASB8Q9H765 288 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 SYNDIG1Q9H7V2 258 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 LRIT1Q9P2V4 623 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 FKBPLQ9UIM3 349 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 APPL1Q9UKG1 709 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 TDRD6O60522 2096 aaKnown RBP9.12□□□□□ -0.95
SNHG1-215ENST00000540904 TRBV23OR9-2A0A075B6M9 112 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CTAGE9A4FU28 777 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 FAM221BA6H8Z2 402 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 C1QTNF9BB2RNN3 333 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 GPR89AB7ZAQ6 455 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CES2O00748 559 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CHUKO15111 745 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 KMOO15229 486 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CASC3O15234 703 aaKnown RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 MT-CO3P00414 261 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 C1QTNF9P0C862 333 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 GPR89BP0CG08 455 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 GLB1P16278 677 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 TCP1P17987 556 aaKnown RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 COILP38432 576 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 XIAPP98170 497 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 GPS1Q13098 491 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 NFATC2Q13469 925 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 HLTFQ14527 1009 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 INSCQ1MX18 579 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 LDLRAP1Q5SW96 308 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 GPRC6AQ5T6X5 926 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CCDC137Q6PK04 289 aaKnown RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 UNQ6494/PRO21346Q6UXR6 183 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 MICALCLQ6ZW33 695 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 LRRTM4Q86VH4 590 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 TRAPPC5Q8IUR0 188 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 ZNF547Q8IVP9 402 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 NAGSQ8N159 534 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 C17orf53Q8N3J3 647 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 DDHD1Q8NEL9 900 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 OR6C4Q8NGE1 309 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 STYXQ8WUJ0 223 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CAPZA3Q96KX2 299 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 NAPGQ99747 312 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 ZCCHC2Q9C0B9 1178 aaKnown RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 FAM96AQ9H5X1 160 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CASS4Q9NQ75 786 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 EIF2B3Q9NR50 452 aaKnown RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 KLC4Q9NSK0 619 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 NLE1Q9NVX2 485 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 SMOXQ9NWM0 555 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 TBC1D29Q9UFV1 150 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 RABGEF1Q9UJ41 708 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CRLS1Q9UJA2 301 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 CLCA2Q9UQC9 943 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 DNAJC16Q9Y2G8 782 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 SLC30A1Q9Y6M5 507 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 RNF215Q9Y6U7 377 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 SPEGQ15772 3267 aa9.11□□□□□ -0.95
SNHG1-215ENST00000540904 ARID1BQ8NFD5 2236 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-215ENST00000540904 HEATR9A2RTY3 570 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 MROH6A6NGR9 719 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 OR2AG2A6NM03 316 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 RHPN2P1A8MT19 583 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 NUDT21O43809 227 aaKnown RBP9.1□□□□□ -0.95
SNHG1-215ENST00000540904 PHF2O75151 1096 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 EML2O95834 649 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 KRT14P02533 472 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 ZNF7P17097 686 aaPredicted RBP9.1□□□□□ -0.95
SNHG1-215ENST00000540904 MSH3P20585 1137 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 ITGALP20701 1170 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 MC4RP32245 332 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 SESN2P58004 480 aaPredicted RBP9.1□□□□□ -0.95
SNHG1-215ENST00000540904 CCL7P80098 99 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 SKIDA1Q1XH10 827 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 ZRANB3Q5FWF4 1079 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms