RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 KIAA0754O94854 1291 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 NDUFA10O95299 355 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 TIAF1O95411 115 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 CLDN7O95471 211 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 PTMAP06454 111 aaKnown RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 MMP2P08253 660 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 RARAP10276 462 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 GZMAP12544 262 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 BRAFP15056 766 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 ZNF8P17098 575 aaPredicted RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 DESP17661 470 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 GARSP41250 739 aaKnown RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 SLC19A1P41440 591 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 CAPZBP47756 277 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 ARSEP51690 589 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 DSC2Q02487 901 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 SLC25A11Q02978 314 aaKnown RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 NIPAL4Q0D2K0 466 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 GALNT2Q10471 571 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 DNASE1L3Q13609 305 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 ERV3-1Q14264 604 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 SMTNL2Q2TAL5 461 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 BOLA3Q53S33 107 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 ZNF517Q6ZMY9 492 aaPredicted RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 ZNF571Q7Z3V5 609 aaPredicted RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 BBS5Q8N3I7 341 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 SSC4DQ8WTU2 575 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 CT55Q8WUE5 264 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 TEKT4Q8WW24 435 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 RSC1A1Q92681 617 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 RNF31Q96EP0 1072 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 SLC41A2Q96JW4 573 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 RUFY1Q96T51 708 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 POLR1EQ9GZS1 481 aaKnown RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 RAB33BQ9H082 229 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 NUP62CLQ9H1M0 184 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 STN1Q9H668 368 aaKnown RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 NT5MQ9NPB1 228 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.2□□□□□ -1.26
YBX3-209ENST00000540747 CUEDC1Q9NWM3 386 aaPredicted RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 DTLQ9NZJ0 730 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 RCOR3Q9P2K3 495 aaPredicted RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 ATXN10Q9UBB4 475 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 SLC23A2Q9UGH3 650 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 AMACRQ9UHK6 382 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 ZNHIT2Q9UHR6 403 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 KCND3Q9UK17 655 aa7.2□□□□□ -1.26
YBX3-209ENST00000540747 PCDHGA9Q9Y5G4 932 aaKnown RBP7.2□□□□□ -1.26
YBX3-209ENST00000540747 CDC14CA4D256 554 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 GPR89AB7ZAQ6 455 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 GRID2O43424 1007 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 MFSD11O43934 449 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 SNX2O60749 519 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 UBXN7O94888 489 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 AGFG2O95081 481 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 ASMTLO95671 621 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 GPR89BP0CG08 455 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 NELFEP18615 380 aaKnown RBP7.19□□□□□ -1.26
YBX3-209ENST00000540747 CES1P23141 567 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 SERPINB6P35237 376 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 ARL4AP40617 200 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 PRKCIP41743 596 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 MAPK9P45984 424 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 DCDC1P59894 354 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 FOXM1Q08050 763 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 IL10RAQ13651 578 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 PAFAH1B3Q15102 231 aaKnown RBP7.19□□□□□ -1.26
YBX3-209ENST00000540747 QPCTQ16769 361 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 UGT8Q16880 541 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 FHL5Q5TD97 284 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 AGAP9Q5VTM2 703 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 CPZQ66K79 652 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 ABRAXAS1Q6UWZ7 409 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 WASH2PQ6VEQ5 465 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 C11orf96Q7Z7L8 435 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 ADGRG6Q86SQ4 1221 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 PHYKPLQ8IUZ5 450 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 ZNF547Q8IVP9 402 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 NDUFAF2Q8N183 169 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 NIPA2Q8N8Q9 360 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 Q8NA96 180 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 CPT1CQ8TCG5 803 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 ADAMTS17Q8TE56 1095 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 STAMBPL1Q96FJ0 436 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 TGM7Q96PF1 710 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 FCRL4Q96PJ5 515 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 TSGA13Q96PP4 275 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 OR6C1Q96RD1 312 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 TRIB3Q96RU7 358 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 TIMM29Q9BSF4 260 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 TWSG1Q9GZX9 223 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 ZMYND15Q9H091 742 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 ISCUQ9H1K1 167 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 FAM83DQ9H4H8 585 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 ACTL8Q9H568 366 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 AKIRIN1Q9H9L7 192 aaPredicted RBP7.19□□□□□ -1.26
YBX3-209ENST00000540747 SLC40A1Q9NP59 571 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 LHX9Q9NQ69 397 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 WASH6PQ9NQA3 447 aa7.19□□□□□ -1.26
YBX3-209ENST00000540747 POT1Q9NUX5 634 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms