RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 RHDQ02161 417 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 PPP1R8Q12972 351 aaKnown RBP12.9□□□□□ -0.34
SFI1-229ENST00000540643 FRG1Q14331 258 aaKnown RBP12.9□□□□□ -0.34
SFI1-229ENST00000540643 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
SFI1-229ENST00000540643 KIAA1841Q6NSI8 718 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 TRIM72Q6ZMU5 477 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 ASB18Q6ZVZ8 466 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 COA7Q96BR5 231 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 AGAP2Q99490 1192 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 TRIM62Q9BVG3 475 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 RBCK1Q9BYM8 510 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 CEP41Q9BYV8 373 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 KCNK13Q9HB14 408 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 RC3H2Q9HBD1 1191 aaKnown RBP12.9□□□□□ -0.34
SFI1-229ENST00000540643 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.9□□□□□ -0.34
SFI1-229ENST00000540643 ENPP5Q9UJA9 477 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 FNDC3AQ9Y2H6 1198 aaKnown RBP12.9□□□□□ -0.34
SFI1-229ENST00000540643 MROH5Q6ZUA9 1318 aa12.9□□□□□ -0.34
SFI1-229ENST00000540643 MBL2P11226 248 aaPredicted RBP12.89□□□□□ -0.35
SFI1-229ENST00000540643 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
SFI1-229ENST00000540643 HLCSP50747 726 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 BATFQ16520 125 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 C3orf33Q6P1S2 294 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 KBTBD6Q86V97 674 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 NACC1Q96RE7 527 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 S100A13Q99584 98 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 NFAT5O94916 1531 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 TCRBV9S1A1TA0A576 114 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 POM121CA8CG34 1229 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 B4GAT1O43505 415 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 HTR3BO95264 441 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 BMP4P12644 408 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 SSTR2P30874 369 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 RCAN1P53805 252 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 CTSWP56202 376 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 PCBP1Q15365 356 aaKnown RBP eCLIP12.89□□□□□ -0.35
SFI1-229ENST00000540643 KRT77Q7Z794 578 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 COLGALT2Q8IYK4 626 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 IZUMO1Q8IYV9 350 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 CBY3A6NI87 242 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 SPCS2Q15005 226 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 SLC9A9Q8IVB4 645 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 OR4D10Q8NGI6 311 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 NKX2-3Q8TAU0 364 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 ZSWIM3Q96MP5 696 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 MCEEQ96PE7 176 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 AGXT2Q9BYV1 514 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 PRDM5Q9NQX1 630 aaPredicted RBP12.89□□□□□ -0.35
SFI1-229ENST00000540643 CHST12Q9NRB3 414 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 GINS2Q9Y248 185 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 PCDHGB6Q9Y5F9 930 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 CHD2O14647 1828 aaKnown RBP12.89□□□□□ -0.35
SFI1-229ENST00000540643 FRMPD2Q68DX3 1309 aaPredicted RBP12.89□□□□□ -0.35
SFI1-229ENST00000540643 BTNL10A8MVZ5 291 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 STAU1O95793 577 aaKnown RBP12.89□□□□□ -0.35
SFI1-229ENST00000540643 C8BP07358 591 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 NCK1P16333 377 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 MAGEA12P43365 314 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 NPY2RP49146 381 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 SMAD4Q13485 552 aaKnown RBP12.89□□□□□ -0.35
SFI1-229ENST00000540643 TSNQ15631 228 aaKnown RBP12.89□□□□□ -0.35
SFI1-229ENST00000540643 ELP2Q6IA86 826 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 OR6B2Q6IFH4 312 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 TMEM199Q8N511 208 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 OR13J1Q8NGT2 312 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 FEM1CQ96JP0 617 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 PIGSQ96S52 555 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 WDR77Q9BQA1 342 aaPredicted RBP12.89□□□□□ -0.35
SFI1-229ENST00000540643 GPR63Q9BZJ6 419 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 REEP4Q9H6H4 257 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 LYVE1Q9Y5Y7 322 aa12.89□□□□□ -0.35
SFI1-229ENST00000540643 TEX13CA0A0J9YWL9 993 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 UBE2QL1A1L167 161 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 RBAK-RBAKDNI3L0D1 243 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 ACOX3O15254 700 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 MSH4O15457 936 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
SFI1-229ENST00000540643 SLC2A2P11168 524 aaPredicted RBP12.88□□□□□ -0.35
SFI1-229ENST00000540643 RFX1P22670 979 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 TGFBR2P37173 567 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 MPP1Q00013 466 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 GRIK4Q16099 956 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 STEAP3Q658P3 488 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 TCEAL6Q6IPX3 200 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 NRARPQ7Z6K4 114 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 TXNRD3Q86VQ6 643 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 TRMT10AQ8TBZ6 339 aaKnown RBP12.88□□□□□ -0.35
SFI1-229ENST00000540643 USP7Q93009 1102 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 EGFL8Q99944 293 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 UNC93B1Q9H1C4 597 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 PIH1D1Q9NWS0 290 aaKnown RBP12.88□□□□□ -0.35
SFI1-229ENST00000540643 SAE1Q9UBE0 346 aaPredicted RBP12.88□□□□□ -0.35
SFI1-229ENST00000540643 COMMD3Q9UBI1 195 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 TMPRSS11EQ9UL52 423 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 A0A0B4J269 797 aa12.88□□□□□ -0.35
SFI1-229ENST00000540643 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
SFI1-229ENST00000540643 TGFB3P10600 412 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms