RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SIRPGQ9P1W8 387 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 GUCA1CO95843 209 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 GJA9P57773 515 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 BNC1Q01954 994 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 OGDHQ02218 1023 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 AP5B1Q2VPB7 878 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 SETMARQ53H47 684 aaPredicted RBP11.01□□□□□ -0.65
PBX1-212ENST00000540236 C1orf186Q6ZWK4 172 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 SPNS2Q8IVW8 549 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 LNX2Q8N448 690 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 LGALS12Q96DT0 336 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 GMCL1Q96IK5 515 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 RIC8BQ9NVN3 520 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 ARMC1Q9NVT9 282 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 GLTPQ9NZD2 209 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 ENPP5Q9UJA9 477 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 MGAT4AQ9UM21 535 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 CHD4Q14839 1912 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 MICAL2O94851 1124 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 APOA4P06727 396 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 PPP5CP53041 499 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 ERVK-25P63136 954 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 SLC35G1Q2M3R5 365 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 CATSPEREQ5SY80 951 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 LYSMD2Q8IV50 215 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 BEND7Q8N7W2 519 aaPredicted RBP11.01□□□□□ -0.65
PBX1-212ENST00000540236 CNTD1Q8N815 330 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 YIPF7Q8N8F6 280 aa11.01□□□□□ -0.65
PBX1-212ENST00000540236 RPF1Q9H9Y2 349 aaKnown RBP11.01□□□□□ -0.65
PBX1-212ENST00000540236 SNNO75324 88 aaPredicted RBP11□□□□□ -0.65
PBX1-212ENST00000540236 MYL4P12829 197 aa11□□□□□ -0.65
PBX1-212ENST00000540236 POLR2CP19387 275 aaPredicted RBP11□□□□□ -0.65
PBX1-212ENST00000540236 ALAS2P22557 587 aa11□□□□□ -0.65
PBX1-212ENST00000540236 CDAN1Q8IWY9 1227 aa11□□□□□ -0.65
PBX1-212ENST00000540236 SPARTQ8N0X7 666 aa11□□□□□ -0.65
PBX1-212ENST00000540236 CACTIN-AS1Q8N1I8 211 aa11□□□□□ -0.65
PBX1-212ENST00000540236 SPPL2AQ8TCT8 520 aa11□□□□□ -0.65
PBX1-212ENST00000540236 C2CD4CQ8TF44 421 aa11□□□□□ -0.65
PBX1-212ENST00000540236 NANSQ9NR45 359 aa11□□□□□ -0.65
PBX1-212ENST00000540236 C3orf18Q9UK00 162 aa11□□□□□ -0.65
PBX1-212ENST00000540236 KCNH4Q9UQ05 1017 aa11□□□□□ -0.65
PBX1-212ENST00000540236 PEX16Q9Y5Y5 336 aa11□□□□□ -0.65
PBX1-212ENST00000540236 SLC15A5A6NIM6 579 aa11□□□□□ -0.65
PBX1-212ENST00000540236 SGCEO43556 437 aa11□□□□□ -0.65
PBX1-212ENST00000540236 KCNK2O95069 426 aa11□□□□□ -0.65
PBX1-212ENST00000540236 SLC10A3P09131 477 aa11□□□□□ -0.65
PBX1-212ENST00000540236 AQP1P29972 269 aa11□□□□□ -0.65
PBX1-212ENST00000540236 BMPR1AP36894 532 aa11□□□□□ -0.65
PBX1-212ENST00000540236 LEPRP48357 1165 aaKnown RBP11□□□□□ -0.65
PBX1-212ENST00000540236 PIK3CGP48736 1102 aa11□□□□□ -0.65
PBX1-212ENST00000540236 CDK18Q07002 472 aa11□□□□□ -0.65
PBX1-212ENST00000540236 FGFBP1Q14512 234 aa11□□□□□ -0.65
PBX1-212ENST00000540236 GRM7Q14831 915 aa11□□□□□ -0.65
PBX1-212ENST00000540236 VGLL2Q8N8G2 317 aa11□□□□□ -0.65
PBX1-212ENST00000540236 C19orf60Q96EN9 201 aa11□□□□□ -0.65
PBX1-212ENST00000540236 SLC30A2Q9BRI3 323 aa11□□□□□ -0.65
PBX1-212ENST00000540236 ACTR8Q9H981 624 aa11□□□□□ -0.65
PBX1-212ENST00000540236 CACYBPQ9HB71 228 aaKnown RBP11□□□□□ -0.65
PBX1-212ENST00000540236 DUS2Q9NX74 493 aaKnown RBP11□□□□□ -0.65
PBX1-212ENST00000540236 SLIT1O75093 1534 aa11□□□□□ -0.65
PBX1-212ENST00000540236 MAGEB16A2A368 324 aa11□□□□□ -0.65
PBX1-212ENST00000540236 ISM1B1AKI9 464 aa11□□□□□ -0.65
PBX1-212ENST00000540236 F8W810 466 aa11□□□□□ -0.65
PBX1-212ENST00000540236 VIPP01282 170 aa11□□□□□ -0.65
PBX1-212ENST00000540236 GADD45AP24522 165 aa11□□□□□ -0.65
PBX1-212ENST00000540236 TPI1P60174 286 aa11□□□□□ -0.65
PBX1-212ENST00000540236 CSTF3Q12996 717 aaKnown RBP11□□□□□ -0.65
PBX1-212ENST00000540236 CLCA4Q14CN2 919 aa11□□□□□ -0.65
PBX1-212ENST00000540236 NDUFAF5Q5TEU4 345 aa11□□□□□ -0.65
PBX1-212ENST00000540236 NAPEPLDQ6IQ20 393 aa11□□□□□ -0.65
PBX1-212ENST00000540236 NRARPQ7Z6K4 114 aa11□□□□□ -0.65
PBX1-212ENST00000540236 TP53INP1Q96A56 240 aa11□□□□□ -0.65
PBX1-212ENST00000540236 C1QTNF1Q9BXJ1 281 aa11□□□□□ -0.65
PBX1-212ENST00000540236 ADAMTS10Q9H324 1103 aa11□□□□□ -0.65
PBX1-212ENST00000540236 CYP3A43Q9HB55 503 aa11□□□□□ -0.65
PBX1-212ENST00000540236 ZFP14Q9HCL3 533 aa11□□□□□ -0.65
PBX1-212ENST00000540236 KRT84Q9NSB2 600 aa11□□□□□ -0.65
PBX1-212ENST00000540236 RNF6Q9Y252 685 aa11□□□□□ -0.65
PBX1-212ENST00000540236 TMEM2Q9UHN6 1383 aa11□□□□□ -0.65
PBX1-212ENST00000540236 CCL22O00626 93 aa11□□□□□ -0.65
PBX1-212ENST00000540236 SGTAO43765 313 aa11□□□□□ -0.65
PBX1-212ENST00000540236 ETV4P43268 484 aa11□□□□□ -0.65
PBX1-212ENST00000540236 ARCN1P48444 511 aaKnown RBP11□□□□□ -0.65
PBX1-212ENST00000540236 DAG1Q14118 895 aa11□□□□□ -0.65
PBX1-212ENST00000540236 TOR2AQ5JU69 321 aa11□□□□□ -0.65
PBX1-212ENST00000540236 SPANXN3Q5MJ09 141 aa11□□□□□ -0.65
PBX1-212ENST00000540236 ZYG11AQ6WRX3 759 aa11□□□□□ -0.65
PBX1-212ENST00000540236 GPR65Q8IYL9 337 aa11□□□□□ -0.65
PBX1-212ENST00000540236 ZNF557Q8N988 423 aaPredicted RBP11□□□□□ -0.65
PBX1-212ENST00000540236 KCNA7Q96RP8 456 aa11□□□□□ -0.65
PBX1-212ENST00000540236 SORT1Q99523 831 aa11□□□□□ -0.65
PBX1-212ENST00000540236 MLPHQ9BV36 600 aaPredicted RBP11□□□□□ -0.65
PBX1-212ENST00000540236 ITPAQ9BY32 194 aa11□□□□□ -0.65
PBX1-212ENST00000540236 GGA3Q9NZ52 723 aa11□□□□□ -0.65
PBX1-212ENST00000540236 TRPM5Q9NZQ8 1165 aa11□□□□□ -0.65
PBX1-212ENST00000540236 ZNF112Q9UJU3 913 aa11□□□□□ -0.65
PBX1-212ENST00000540236 LRRC14BA6NHZ5 514 aa10.99□□□□□ -0.65
PBX1-212ENST00000540236 POLR1CO15160 346 aaPredicted RBP10.99□□□□□ -0.65
PBX1-212ENST00000540236 ANXA6P08133 673 aa10.99□□□□□ -0.65
PBX1-212ENST00000540236 PCDH1Q08174 1060 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms