RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CPNE7Q9UBL6 633 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 KLHL3Q9UH77 587 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 SHOC2Q9UQ13 582 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 ZNF711Q9Y462 761 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 KMOO15229 486 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 NDST3O95803 873 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 MMP2P08253 660 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 FAM87AP0C7U9 286 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 TNNT1P13805 278 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 AMD1P17707 334 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 NR2C2P49116 596 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 DYNLT1P63172 113 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 MC2RQ01718 297 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 MC1RQ01726 317 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 TBR1Q16650 682 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 LINC00303Q3SY05 128 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 CRTC3Q6UUV7 619 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 CPNE8Q86YQ8 564 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 CNGA4Q8IV77 575 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 GDAP1Q8TB36 358 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 GLYATL1Q969I3 302 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 FERMT1Q9BQL6 677 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 UCK1Q9HA47 277 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 ABHD10Q9NUJ1 306 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 OCIAD1Q9NX40 245 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 ATXN10Q9UBB4 475 aa15.11■□□□□ 0.01
UBE3B-211ENST00000539843 CNOT6Q9ULM6 557 aaKnown RBP15.11■□□□□ 0.01
UBE3B-211ENST00000539843 POLR1CO15160 346 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-211ENST00000539843 ZNF8P17098 575 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-211ENST00000539843 HALP42357 657 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 CCR10P46092 362 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 TEX44Q53QW1 395 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 RBM12BQ8IXT5 1001 aaKnown RBP15.1■□□□□ 0.01
UBE3B-211ENST00000539843 CNTD1Q8N815 330 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 EXD3Q8N9H8 876 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 TFB1MQ8WVM0 346 aaKnown RBP15.1■□□□□ 0.01
UBE3B-211ENST00000539843 RNF25Q96BH1 459 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-211ENST00000539843 OLFM3Q96PB7 478 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 PLEKHG4BQ96PX9 1271 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 WDR24Q96S15 920 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 TIMM29Q9BSF4 260 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 CEP41Q9BYV8 373 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 SLC25A18Q9H1K4 315 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 TRABDQ9H4I3 376 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 NHEJ1Q9H9Q4 299 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-211ENST00000539843 LUC7LQ9NQ29 371 aaKnown RBP15.1■□□□□ 0.01
UBE3B-211ENST00000539843 FBXO8Q9NRD0 319 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 POT1Q9NUX5 634 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 GEMIN8Q9NWZ8 242 aaKnown RBP15.1■□□□□ 0.01
UBE3B-211ENST00000539843 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.1■□□□□ 0.01
UBE3B-211ENST00000539843 INTUQ9ULD6 942 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 SCN8AQ9UQD0 1980 aa15.1■□□□□ 0.01
UBE3B-211ENST00000539843 MFAP3LO75121 409 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 CDK14O94921 469 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 WISP1O95388 367 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 EML2O95834 649 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 ANKRD34CP0C6C1 535 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 PIRTP0C851 137 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 LIFP15018 202 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 IDSP22304 550 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 CYP4F2P78329 520 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 IHHQ14623 411 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 ASTE1Q2TB18 679 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-211ENST00000539843 PLA2G4EQ3MJ16 856 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 ARHGAP22Q7Z5H3 698 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 TMC3Q7Z5M5 1100 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 ESX1Q8N693 406 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 GPR26Q8NDV2 337 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 BRSK1Q8TDC3 778 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 CXorf40BQ96DE9 158 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 RTP4Q96DX8 246 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 TRIB3Q96RU7 358 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 GLOD4Q9HC38 313 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 PRDM8Q9NQV8 689 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 STARD5Q9NSY2 213 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 SPTLC3Q9NUV7 552 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 HACD3Q9P035 362 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 KLHL8Q9P2G9 620 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-211ENST00000539843 FAM153AQ9UHL3 310 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 DNAJC16Q9Y2G8 782 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.09■□□□□ 0.01
UBE3B-211ENST00000539843 KALRNO60229 2985 aa15.09■□□□□ 0.01
UBE3B-211ENST00000539843 A6NCN8 305 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 TOX3O15405 576 aaPredicted RBP15.08■□□□□ 0
UBE3B-211ENST00000539843 PSTPIP1O43586 416 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 KCNJ13O60928 360 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 PMPCBO75439 489 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 RASSF9O75901 435 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 UBXN7O94888 489 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 ZNF7P17097 686 aaPredicted RBP15.08■□□□□ 0
UBE3B-211ENST00000539843 XRCC1P18887 633 aaPredicted RBP15.08■□□□□ 0
UBE3B-211ENST00000539843 FOXM1Q08050 763 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 ABHD18Q0P651 414 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 SEPT6Q14141 434 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 SEPT7Q16181 437 aaKnown RBP15.08■□□□□ 0
UBE3B-211ENST00000539843 NPNTQ6UXI9 565 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 TMEM26Q6ZUK4 368 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 ADGRG6Q86SQ4 1221 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 TRAPPC5Q8IUR0 188 aa15.08■□□□□ 0
UBE3B-211ENST00000539843 VSTM4Q8IW00 320 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms