RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 NTRK1P04629 796 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 SERPINB1P30740 379 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 MRPL19P49406 292 aaKnown RBP17.11■□□□□ 0.33
C2CD3-213ENST00000539061 PFKFB4Q16877 469 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 CTU2Q2VPK5 515 aaKnown RBP17.11■□□□□ 0.33
C2CD3-213ENST00000539061 PRAMEF18Q5VWM3 479 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 ADCK1Q86TW2 530 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 OR6Q1Q8NGQ2 317 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 NSUN5Q96P11 429 aaKnown RBP17.11■□□□□ 0.33
C2CD3-213ENST00000539061 CCDC90BQ9GZT6 254 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 POLR3BQ9NW08 1133 aaPredicted RBP17.11■□□□□ 0.33
C2CD3-213ENST00000539061 NAALAD2Q9Y3Q0 740 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 PTGES3LE9PB15 166 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 MATN3O15232 486 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 CRCPO75575 148 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 NPPAP01160 153 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 PGK2P07205 417 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 CD1DP15813 335 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 ZFP36L2P47974 494 aaKnown RBP17.11■□□□□ 0.33
C2CD3-213ENST00000539061 CXCR3P49682 368 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 POLR2JP52435 117 aaKnown RBP17.11■□□□□ 0.33
C2CD3-213ENST00000539061 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
C2CD3-213ENST00000539061 SLC27A1Q6PCB7 646 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 LIMS2Q7Z4I7 341 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 PIM3Q86V86 326 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 HID1Q8IV36 788 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 MBOAT4Q96T53 435 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 SIAEQ9HAT2 523 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 SMURF2Q9HAU4 748 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 PCDH12Q9NPG4 1184 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 SUN2Q9UH99 717 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 ZNF229Q9UJW7 825 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 AGXTP21549 392 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 UFM1P61960 85 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 CCNA1P78396 465 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 SF3B4Q15427 424 aaKnown RBP eCLIP17.1■□□□□ 0.33
C2CD3-213ENST00000539061 HIST2H2ACQ16777 129 aaPredicted RBP17.1■□□□□ 0.33
C2CD3-213ENST00000539061 ALKAL1Q6UXT8 129 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 ARMC8Q8IUR7 673 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 TRIB2Q92519 343 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 GLMNQ92990 594 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 AMBRA1Q9C0C7 1298 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 RBM22Q9NW64 420 aaKnown RBP eCLIP17.1■□□□□ 0.33
C2CD3-213ENST00000539061 THG1LQ9NWX6 298 aaKnown RBP17.1■□□□□ 0.33
C2CD3-213ENST00000539061 KLQ9UEF7 1012 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 UNCXA6NJT0 531 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 SLC1A7O00341 560 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 KATNA1O75449 491 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 CHRNA1P02708 482 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 ANXA6P08133 673 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 WARSP23381 471 aaKnown RBP17.1■□□□□ 0.33
C2CD3-213ENST00000539061 HOXA11P31270 313 aaPredicted RBP17.1■□□□□ 0.33
C2CD3-213ENST00000539061 RCVRNP35243 200 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 ADPRMQ3LIE5 342 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 TIGD2Q4W5G0 525 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 SULT1C3Q6IMI6 304 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 SAMD7Q7Z3H4 446 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 RALGPS2Q86X27 583 aaPredicted RBP17.1■□□□□ 0.33
C2CD3-213ENST00000539061 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 OSBPL10Q9BXB5 764 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 SPC25Q9HBM1 224 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 LTB4R2Q9NPC1 389 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 CNGB3Q9NQW8 809 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 COMMD8Q9NX08 183 aa17.1■□□□□ 0.33
C2CD3-213ENST00000539061 ZSWIM8A7E2V4 1837 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 MAFKO60675 156 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 RECQL4O94761 1208 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 HLA-DQB2P05538 268 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 PIGAP37287 484 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 SV2CQ496J9 727 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 NOMO2Q5JPE7 1267 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 UGT3A1Q6NUS8 523 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 LDB1Q86U70 411 aaPredicted RBP17.09■□□□□ 0.33
C2CD3-213ENST00000539061 DTWD1Q8N5C7 304 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 OR13J1Q8NGT2 312 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 OR6P1Q8NGX9 317 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 NDNFQ8TB73 568 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 PHF10Q8WUB8 498 aaKnown RBP17.09■□□□□ 0.33
C2CD3-213ENST00000539061 CPNE5Q9HCH3 593 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 RGS18Q9NS28 235 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 SBF1O95248 1867 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 S1PR4O95977 384 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 LGALS2P05162 132 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 USP17L7P0C7H9 530 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 PRR35P0CG20 571 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 RABGGTBP53611 331 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 WNT3AP56704 352 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 CDC20Q12834 499 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 LCP2Q13094 533 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 KCNAB2Q13303 367 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 KCTD2Q14681 263 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 MAPK11Q15759 364 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 PCSK7Q16549 785 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 BEND5Q7L4P6 421 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 SULF1Q8IWU6 871 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 ARHGAP12Q8IWW6 846 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 FAR1Q8WVX9 515 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 RORBQ92753 470 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 RNF34Q969K3 372 aa17.09■□□□□ 0.33
C2CD3-213ENST00000539061 CCDC97Q96F63 343 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms