RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 FAM83DQ9H4H8 585 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 ACTL8Q9H568 366 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 PCDH18Q9HCL0 1135 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 SCINQ9Y6U3 715 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 MED13Q9UHV7 2174 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 PDZK1P1A8MUH7 402 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 MFSD11O43934 449 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 NUAK1O60285 661 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 SPAG6O75602 509 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 MTA2O94776 668 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 TIAF1O95411 115 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 PRLP01236 227 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 PGDP52209 483 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 RPS18P62269 152 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 INSCQ1MX18 579 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 NADK2Q4G0N4 442 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 BOLA3Q53S33 107 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 CACHD1Q5VU97 1274 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 ALS2CLQ60I27 953 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 CPZQ66K79 652 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 PPP1R3BQ86XI6 285 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 LRRN4Q8WUT4 740 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 RUFY1Q96T51 708 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 CARD9Q9H257 536 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 UCK1Q9HA47 277 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 PCDH9Q9HC56 1237 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 PKD2L2Q9NZM6 624 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 ZNF624Q9P2J8 865 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 PADI1Q9ULC6 663 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 DNAJC16Q9Y2G8 782 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 CRYBG3Q68DQ2 2970 aa13.8□□□□□ -0.2
SMARCA4-206ENST00000538456 LRRC53A6NM62 1247 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 TOX3O15405 576 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 SLC4A1P02730 911 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 FGF5P12034 268 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 XRCC1P18887 633 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 CDK11BP21127 795 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 CA4P22748 312 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 RPL10P27635 214 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 SLC19A1P41440 591 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 CAPZBP47756 277 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 ZNF165P49910 485 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 SEMA5AQ13591 1074 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 KRT81Q14533 505 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 ASIC2Q16515 512 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 ANKRD20A8PQ5CZ79 823 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 ZNF569Q5MCW4 686 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 ALG1LQ6GMV1 187 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 IRGCQ6NXR0 463 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 ZNF571Q7Z3V5 609 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 APLFQ8IW19 511 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 AOPEPQ8N6M6 819 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 CCHCR1Q8TD31 782 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 SPATA16Q9BXB7 569 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 BRD8Q9H0E9 1235 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 HAUS4Q9H6D7 363 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 LHX9Q9NQ69 397 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 RBM22Q9NW64 420 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 DTLQ9NZJ0 730 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 SLC23A2Q9UGH3 650 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 PCDHGA6Q9Y5G7 932 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 TEP1Q99973 2627 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-206ENST00000538456 OR52A4PA6NMU1 304 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 SLC25A14O95258 325 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 HLA-DQB2P05538 268 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 CD48P09326 243 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 DRG2P55039 364 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 PPP1CAP62136 330 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 MYL5Q02045 173 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 NIPAL4Q0D2K0 466 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 TUBB3Q13509 450 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 GPR18Q14330 331 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 KCNAB1Q14722 419 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 PRR30Q53SZ7 412 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 E4F1Q66K89 784 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 PWWP2BQ6NUJ5 590 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 FAM199XQ6PEV8 388 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 PRSS42Q7Z5A4 293 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 ARRDC2Q8TBH0 407 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 BTBD6Q96KE9 485 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 LYSMD1Q96S90 227 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 SLC25A23Q9BV35 468 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 MRPL47Q9HD33 250 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 CASS4Q9NQ75 786 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 LUZP4Q9P127 313 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 TRIM10Q9UDY6 481 aa13.78□□□□□ -0.2
SMARCA4-206ENST00000538456 GOLGA6L3A6NEY3 463 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 ARGFXA6NJG6 315 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 C21orf140B9A014 251 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 DDX3XO00571 662 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 MATN3O15232 486 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 MTX2O75431 263 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 MT-ND3P03897 115 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 GZMAP12544 262 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 IL4RP24394 825 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 SSR1P43307 286 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 CCL11P51671 97 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms