RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 KCNA10Q16322 511 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 SPATS1Q496A3 300 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 TTC23Q5W5X9 447 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 OSTM1Q86WC4 334 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 GATAD2AQ86YP4 633 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 UBQLNLQ8IYU4 475 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 CLYBLQ8N0X4 340 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 MINDY1Q8N5J2 469 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 NAT16Q8N8M0 369 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 YIPF6Q96EC8 236 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 AURKBQ96GD4 344 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ASB2Q96Q27 587 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 CGRRF1Q99675 332 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 GDF15Q99988 308 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 C1QTNF1Q9BXJ1 281 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 MUC13Q9H3R2 512 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 MEAF6Q9HAF1 191 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 RPRD1BQ9NQG5 326 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 OSGIN1Q9UJX0 560 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ANAPC2Q9UJX6 822 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 PCDHB3Q9Y5E6 796 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 THSD7BQ9C0I4 1608 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 PABPN1LA6NDY0 278 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 ALDH4A1P30038 563 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 HOXC8P31273 242 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 OTUD3Q5T2D3 398 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 SH3PXD2AQ5TCZ1 1133 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 GDF6Q6KF10 455 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 P2RY8Q86VZ1 359 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 DEPDC4Q8N2C3 294 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 CELF2-AS1Q8N7Q2 184 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 SMG8Q8ND04 991 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 MCFD2Q8NI22 146 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 FAR1Q8WVX9 515 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 WNT8BQ93098 351 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 NXNL1Q96CM4 212 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 ZFYVE19Q96K21 471 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 TSNARE1Q96NA8 513 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 WDR6Q9NNW5 1121 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 EIF2B3Q9NR50 452 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 PIH1D1Q9NWS0 290 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 PAQR5Q9NXK6 330 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 ANK1P16157 1881 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 AGAP5A6NIR3 686 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 TARM1B6A8C7 271 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 DLX3O60479 287 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 SOAT2O75908 522 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 ASS1P00966 412 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 STAG3L1P0CL83 205 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 HOXA11P31270 313 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 ATP4BP51164 291 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 AP2S1P53680 142 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 TFAMQ00059 246 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 TAGLNQ01995 201 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 EMX1Q04741 257 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 EIF2B5Q13144 721 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 DAG1Q14118 895 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 FRG1Q14331 258 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 GALNT3Q14435 633 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 ACAP2Q15057 778 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 MEP1AQ16819 746 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 PNCKQ6P2M8 343 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 CES3Q6UWW8 571 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 RETREG3Q86VR2 466 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 CCNYL1Q8N7R7 359 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 KIAA1958Q8N8K9 716 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 PSD4Q8NDX1 1056 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 FAM83FQ8NEG4 500 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 DPF3Q92784 378 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 MCRS1Q96EZ8 462 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 ST6GAL2Q96JF0 529 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 SCYL1Q96KG9 808 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 SLC30A3Q99726 388 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 MMP27Q9H306 513 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 TM9SF3Q9HD45 589 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 MAP10Q9P2G4 905 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 TLK1Q9UKI8 766 aa11.28□□□□□ -0.6
SEMA4D-221ENST00000537934 ZBBXA8MT70 800 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 CST3P01034 146 aaPredicted RBP11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 ALPLP05186 524 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 DARSP14868 501 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 ARNTP27540 789 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 CSRP3P50461 194 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 TARDBPQ13148 414 aaKnown RBP eCLIP11.27□□□□□ -0.612e-6■■■□□ 18.6
SEMA4D-221ENST00000537934 PSMD5Q16401 504 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 TYSND1Q2T9J0 566 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 BEND5Q7L4P6 421 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 CCDC185Q8N715 623 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 OR9I1Q8NGQ6 314 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 OR5H6Q8NGV6 325 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 RORBQ92753 470 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 RDH12Q96NR8 316 aa11.27□□□□□ -0.61
SEMA4D-221ENST00000537934 FCRL3Q96P31 734 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms