RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TMEM8BA6NDV4 472 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 URADA6NGE7 173 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 MAGEB17A8MXT2 336 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 SLC16A5O15375 505 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 TBCAO75347 108 aaKnown RBP5.34□□□□□ -1.55
PRKDC-208ENST00000536710 DNASE1P24855 282 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 LMO1P25800 156 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 NMBRP28336 390 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 SSTR2P30874 369 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 APOBEC1P41238 236 aaKnown RBP5.34□□□□□ -1.55
PRKDC-208ENST00000536710 PCYT1AP49585 367 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 CLCNKAP51800 687 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 SEC61BP60468 96 aaKnown RBP5.34□□□□□ -1.55
PRKDC-208ENST00000536710 DSC1Q08554 894 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 SNAPC1Q16533 368 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 DECR1Q16698 335 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 MYLK3Q32MK0 819 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 ATP13A5Q4VNC0 1218 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 C6orf163Q5TEZ5 329 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 ZDHHC20Q5W0Z9 365 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 TMEM211Q6ICI0 200 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 CAMKMTQ7Z624 323 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 FAM9BQ8IZU0 186 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 UTP15Q8TED0 518 aaKnown RBP5.34□□□□□ -1.55
PRKDC-208ENST00000536710 DNAAF4Q8WXU2 420 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 SPATA17Q96L03 361 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 MTERF1Q99551 399 aaKnown RBP5.34□□□□□ -1.55
PRKDC-208ENST00000536710 DENND2DQ9H6A0 471 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-208ENST00000536710 ERVMER34-1Q9H9K5 563 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 MRGBPQ9NV56 204 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 C5AR2Q9P296 337 aa5.34□□□□□ -1.55
PRKDC-208ENST00000536710 AGO1Q9UL18 857 aaKnown RBP5.34□□□□□ -1.55
PRKDC-208ENST00000536710 A8MXE2 369 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 ANKRD28O15084 1053 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 KCNN4O15554 427 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 KCNJ13O60928 360 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 TADA2AO75478 443 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 SCP2P22307 547 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 NR4A2P43354 598 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 CCR3P51677 355 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 RAD23AP54725 363 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 CSE1LP55060 971 aaKnown RBP5.33□□□□□ -1.56
PRKDC-208ENST00000536710 DHX34Q14147 1143 aaKnown RBP5.33□□□□□ -1.56
PRKDC-208ENST00000536710 TDRD12Q587J7 1177 aaKnown RBP5.33□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF628Q5EBL2 1059 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 EFHC1Q5JVL4 640 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 C18orf63Q68DL7 685 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 PAPD4Q6PIY7 484 aaKnown RBP5.33□□□□□ -1.56
PRKDC-208ENST00000536710 SLFN11Q7Z7L1 901 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 TC2NQ8N9U0 490 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 RBM15BQ8NDT2 890 aaKnown RBP5.33□□□□□ -1.56
PRKDC-208ENST00000536710 WFIKKN2Q8TEU8 576 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 MRPS27Q92552 414 aaKnown RBP5.33□□□□□ -1.56
PRKDC-208ENST00000536710 C3orf30Q96M34 536 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 DACH2Q96NX9 599 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 OR1F2PQ96R84 312 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 ANKRD2Q9GZV1 360 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 GDE1Q9NZC3 331 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 TSPYL4Q9UJ04 414 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 ANAPC5Q9UJX4 755 aa5.33□□□□□ -1.56
PRKDC-208ENST00000536710 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 TCRBV21S2A2A0A5A6 115 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 GOLGA6L9A6NEM1 432 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 TMEM189-UBE2V1I3L0A0 370 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 J3QR06 171 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 NDUFS4O43181 175 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 HRH2P25021 359 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 MC5RP33032 325 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 FASLGP48023 281 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF81P51508 661 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 CDH13P55290 713 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 CD81P60033 236 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 SIRPAP78324 504 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 PDE1BQ01064 536 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 UBE2V1Q13404 147 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 MVPQ14764 893 aaKnown RBP5.32□□□□□ -1.56
PRKDC-208ENST00000536710 ALDH1L2Q3SY69 923 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 CRY2Q49AN0 593 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 XKR9Q5GH70 373 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 KRBOX4Q5JUW0 171 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 LRCH2Q5VUJ6 765 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF425Q6IV72 752 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 C11orf87Q6NUJ2 197 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 TPRG1Q6ZUI0 275 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 CHST3Q7LGC8 479 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 TECPR1Q7Z6L1 1165 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 NRROSQ86YC3 692 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 CEP97Q8IW35 865 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 AFAP1Q8N556 730 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 ACVR1CQ8NER5 493 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 TSPAN14Q8NG11 270 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 TBC1D16Q8TBP0 767 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF778Q96MU6 729 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 HAO2Q9NYQ3 351 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 CRNNQ9UBG3 495 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-208ENST00000536710 PADI3Q9ULW8 664 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 CCL27Q9Y4X3 112 aa5.32□□□□□ -1.56
PRKDC-208ENST00000536710 FAM90A26D6RGX4 464 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CCER2I3L3R5 266 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms