RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 HEPACAM2A8MVW5 462 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ANKRD66B4E2M5 251 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ITM2AO43736 263 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CLASP2O75122 1294 aaKnown RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 KRT75O95678 551 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 NDST3O95803 873 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 IGLV3-25P01717 112 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ALADP13716 330 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CLCN4P51793 760 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 FOLH1Q04609 750 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 FLOT2Q14254 428 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 DGKKQ5KSL6 1271 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 TSTD2Q5T7W7 516 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ELMSAN1Q6PJG2 1045 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 C4orf22Q6V702 233 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ARPINQ7Z6K5 226 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ZNF786Q8N393 782 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SIDT2Q8NBJ9 832 aaKnown RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 GABPB2Q8TAK5 448 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 UTP4Q969X6 686 aaKnown RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 RNF31Q96EP0 1072 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ACOX2Q99424 681 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 GPR21Q99679 349 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 NAT9Q9BTE0 207 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 OCEL1Q9H607 264 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 IL1RL2Q9HB29 575 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ZFP14Q9HCL3 533 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SPHK2Q9NRA0 654 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 BLOC1S6Q9UL45 172 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SPTBN5Q9NRC6 3674 aaKnown RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 NUP214P35658 2090 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 TPST1O60507 370 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SNX2O60749 519 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 GPC4O75487 556 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ALOX15P16050 662 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 PSMC3P17980 439 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 GNAZP19086 355 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 PSMD8P48556 350 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 PXNP49023 591 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 METAP1P53582 386 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ECT2LQ008S8 904 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 NRF1Q16656 503 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 TANGO2Q6ICL3 276 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 PSAPL1Q6NUJ1 521 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 Q6ZVL8 140 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 DHDDSQ86SQ9 333 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 DEFB119Q8N690 84 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 TMCO5AQ8N6Q1 288 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 C1orf74Q96LT6 269 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 UCN2Q96RP3 112 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 IL12RB2Q99665 862 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CPNE1Q99829 537 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SLC6A17Q9H1V8 727 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 MKS1Q9NXB0 559 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ZMYM5Q9UJ78 669 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SOX13Q9UN79 622 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 WDFY4Q6ZS81 3184 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ZCWPW2A0A1B0GU75 182 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ILVBLA1L0T0 632 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 FAM58BPP0C7Q3 252 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 LPOP22079 712 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 PEX2P28328 305 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SERPINB5P36952 375 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 MAPKAPK2P49137 400 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SERPINB9P50453 376 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SNRPD1P62314 119 aaKnown RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CAMK1Q14012 370 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 RPS6KA2Q15349 733 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CXorf57Q6NSI4 855 aaKnown RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CRTC3Q6UUV7 619 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SUSD6Q92537 303 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 SNX19Q92543 992 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 TIFAQ96CG3 184 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 IMP4Q96G21 291 aaKnown RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CDKN2AIPNLQ96HQ2 116 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 EFHD1Q9BUP0 239 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 BOCQ9BWV1 1114 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ACE2Q9BYF1 805 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 FRMD8Q9BZ67 464 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 OSBPL6Q9BZF3 934 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CLPBQ9H078 707 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CCDC134Q9H6E4 229 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 ATP13A3Q9H7F0 1226 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 LIN28AQ9H9Z2 209 aaKnown RBP8.17□□□□□ -1.1
ABCA4-207ENST00000536513 CASS4Q9NQ75 786 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 DOCK8Q8NF50 2099 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 MICAL3Q7RTP6 2002 aa8.17□□□□□ -1.1
ABCA4-207ENST00000536513 TULP3O75386 442 aa8.16□□□□□ -1.1
ABCA4-207ENST00000536513 LEFTY1O75610 366 aa8.16□□□□□ -1.1
ABCA4-207ENST00000536513 ABHD2P08910 425 aa8.16□□□□□ -1.1
ABCA4-207ENST00000536513 EPHA3P29320 983 aa8.16□□□□□ -1.1
ABCA4-207ENST00000536513 NUDT2P50583 147 aa8.16□□□□□ -1.1
ABCA4-207ENST00000536513 MRPS22P82650 360 aaKnown RBP8.16□□□□□ -1.1
ABCA4-207ENST00000536513 OCA2Q04671 838 aa8.16□□□□□ -1.1
ABCA4-207ENST00000536513 RING1Q06587 406 aa8.16□□□□□ -1.1
ABCA4-207ENST00000536513 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
ABCA4-207ENST00000536513 RBBP7Q16576 425 aa8.16□□□□□ -1.1
ABCA4-207ENST00000536513 FAM78AQ5JUQ0 283 aa8.16□□□□□ -1.1
ABCA4-207ENST00000536513 C6orf183Q5T699 404 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms