RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 SPRP35270 261 aaPredicted RBP16.08■□□□□ 0.16
VAMP1-205ENST00000535927 IGFALSP35858 605 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 SIM2Q14190 667 aaPredicted RBP16.08■□□□□ 0.16
VAMP1-205ENST00000535927 TRMT10BQ6PF06 316 aaKnown RBP16.08■□□□□ 0.16
VAMP1-205ENST00000535927 LRIG3Q6UXM1 1119 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 HDXQ7Z353 690 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 CCDC91Q7Z6B0 441 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 SLC41A1Q8IVJ1 513 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 IQCKQ8N0W5 287 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 OTUD6BQ8N6M0 293 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 FRMD1Q8N878 549 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 C1orf216Q8TAB5 229 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 KLHDC7BQ96G42 594 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 BMFQ96LC9 184 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 CCDC68Q9H2F9 335 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 EPB41L4BQ9H329 900 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 VIPAS39Q9H9C1 493 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 MBNL1Q9NR56 388 aaKnown RBP16.08■□□□□ 0.16
VAMP1-205ENST00000535927 KLHL42Q9P2K6 505 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 PCDHGA5Q9Y5G8 931 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 A0A1B0GTW7 788 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 KPNA5O15131 536 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 VILLO15195 856 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 RAD51BO15315 384 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 BCAT2O15382 392 aaPredicted RBP16.07■□□□□ 0.16
VAMP1-205ENST00000535927 UGT1A9O60656 530 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 KRT38O76015 456 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 C1QAP02745 245 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 PCCBP05166 539 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 INHBAP08476 426 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 ATP1B2P14415 290 aaPredicted RBP16.07■□□□□ 0.16
VAMP1-205ENST00000535927 UGT1A6P19224 532 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 UGT1A1P22309 533 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 UGT1A4P22310 534 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 UGT1A3P35503 534 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 UGT1A5P35504 534 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 MSH2P43246 934 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 BLKP51451 505 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 AFF3P51826 1226 aaKnown RBP16.07■□□□□ 0.16
VAMP1-205ENST00000535927 THOP1P52888 689 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 TMEM115Q12893 351 aaPredicted RBP16.07■□□□□ 0.16
VAMP1-205ENST00000535927 GTF2H3Q13889 308 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 NFATC4Q14934 902 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 GPRC6AQ5T6X5 926 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 PEAR1Q5VY43 1037 aaPredicted RBP16.07■□□□□ 0.16
VAMP1-205ENST00000535927 PSAPL1Q6NUJ1 521 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 HEATR4Q86WZ0 1026 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 SYT12Q8IV01 421 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 CTAGE3PQ8IX95 158 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 PIANPQ8IYJ0 282 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 TMEFF1Q8IYR6 380 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 RGL4Q8IZJ4 473 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 GDAP1Q8TB36 358 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 SLC44A1Q8WWI5 657 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 KLK6Q92876 244 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 MTBPQ96DY7 904 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 SCARF2Q96GP6 870 aaPredicted RBP16.07■□□□□ 0.16
VAMP1-205ENST00000535927 TRIM56Q9BRZ2 755 aaKnown RBP16.07■□□□□ 0.16
VAMP1-205ENST00000535927 CLPBQ9H078 707 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 RHOJQ9H4E5 214 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 UGT1A7Q9HAW7 530 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 UGT1A10Q9HAW8 530 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 UGT1A8Q9HAW9 530 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 GPR27Q9NS67 375 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 EIF2B4Q9UI10 523 aaKnown RBP16.07■□□□□ 0.16
VAMP1-205ENST00000535927 RAB23Q9ULC3 237 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 INVSQ9Y283 1065 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 PLXNB3Q9ULL4 1909 aa16.07■□□□□ 0.16
VAMP1-205ENST00000535927 PIKFYVEQ9Y2I7 2098 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 CCL22O00626 93 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 ATP8B1O43520 1251 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 KRT37O76014 449 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 OR56A5P0C7T3 313 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 SKIV2L2P42285 1042 aaKnown RBP16.06■□□□□ 0.16
VAMP1-205ENST00000535927 SLC1A2P43004 574 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 CD151P48509 253 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 PLOD1Q02809 727 aaPredicted RBP16.06■□□□□ 0.16
VAMP1-205ENST00000535927 IFFO1Q0D2I5 559 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 UAP1Q16222 522 aaPredicted RBP16.06■□□□□ 0.16
VAMP1-205ENST00000535927 DBN1Q16643 649 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 UGT3A1Q6NUS8 523 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 ADGRD1Q6QNK2 874 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 MACC1Q6ZN28 852 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 GCNT7Q6ZNI0 430 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 CAPN12Q6ZSI9 719 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 STRA8Q7Z7C7 330 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 PPM1NQ8N819 430 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 PLA2G15Q8NCC3 412 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 SNX19Q92543 992 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 WDR92Q96MX6 357 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 PANX3Q96QZ0 392 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 AGAP2Q99490 1192 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 ERVMER34-1Q9H9K5 563 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 EBF2Q9HAK2 575 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 AASDHPPTQ9NRN7 309 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 GNPTGQ9UJJ9 305 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 SLC17A4Q9Y2C5 497 aa16.06■□□□□ 0.16
VAMP1-205ENST00000535927 FNDC3AQ9Y2H6 1198 aaKnown RBP16.06■□□□□ 0.16
VAMP1-205ENST00000535927 CACNA1AO00555 2505 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms