RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 CTBP1Q13363 440 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 BRD3Q15059 726 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 MAP9Q49MG5 647 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 TPRG1LQ5T0D9 272 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 ZNF648Q5T619 568 aaPredicted RBP15.42■□□□□ 0.06
CNN1-202ENST00000535659 ZNF470Q6ECI4 717 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 ENPP7Q6UWV6 458 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 CNTN4Q8IWV2 1026 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 CDKL2Q92772 493 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 CAVIN3Q969G5 261 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 WDR92Q96MX6 357 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 FUT8Q9BYC5 575 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 ARRDC1-AS1Q9H2J1 176 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 ATXN10Q9UBB4 475 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 OAS3Q9Y6K5 1087 aaKnown RBP15.42■□□□□ 0.06
CNN1-202ENST00000535659 CACNA1HO95180 2353 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 IGLV3-16A0A075B6K0 115 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 A0A1B0GVT2 93 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 TNFRSF10CO14798 259 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 RIPK2O43353 540 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 VEGFDO43915 354 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 MTX2O75431 263 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 NDUFS3O75489 264 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 CDK14O94921 469 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 S1PR4O95977 384 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 C1QAP02745 245 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 CEACAM5P06731 702 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 RALBP11234 206 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 MSH3P20585 1137 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 POLD2P49005 469 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 ITIH4Q14624 930 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 TYSND1Q2T9J0 566 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 KHDC1Q4VXA5 237 aaKnown RBP15.41■□□□□ 0.06
CNN1-202ENST00000535659 UBAP2Q5T6F2 1119 aaKnown RBP15.41■□□□□ 0.06
CNN1-202ENST00000535659 LAYNQ6UX15 382 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 MACC1Q6ZN28 852 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 ADGRG6Q86SQ4 1221 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 DENND6AQ8IWF6 608 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 C2CD4AQ8NCU7 369 aaPredicted RBP15.41■□□□□ 0.06
CNN1-202ENST00000535659 OR56A4Q8NGH8 313 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 DCUN1D1Q96GG9 259 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 PHOX2BQ99453 314 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 OR2AG1Q9H205 316 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 SMYD2Q9NRG4 433 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 FAM86C1Q9NVL1 165 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 ZFATQ9P243 1243 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 VPS18Q9P253 973 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 RABGEF1Q9UJ41 708 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 FBXO5Q9UKT4 447 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 SLC17A4Q9Y2C5 497 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 ANKRD6Q9Y2G4 727 aa15.41■□□□□ 0.06
CNN1-202ENST00000535659 A0A087WUV0 522 aaPredicted RBP15.4■□□□□ 0.06
CNN1-202ENST00000535659 FAM159BA6NKW6 160 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 CFAP99D6REC4 459 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 ERLIN1O75477 346 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 RETP07949 1114 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 ATP1B2P14415 290 aaPredicted RBP15.4■□□□□ 0.06
CNN1-202ENST00000535659 ZNF7P17097 686 aaPredicted RBP15.4■□□□□ 0.06
CNN1-202ENST00000535659 AKT1P31749 480 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 NXPH1P58417 271 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 B4GALNT1Q00973 533 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 FZD2Q14332 565 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 SLC29A2Q14542 456 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 SLC23A3Q6PIS1 610 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 DOK6Q6PKX4 331 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 KIAA0408Q6ZU52 694 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 SPATS2Q86XZ4 545 aaKnown RBP15.4■□□□□ 0.06
CNN1-202ENST00000535659 RBFAQ8N0V3 343 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 CYTH2Q99418 400 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 BOCQ9BWV1 1114 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 ZCCHC2Q9C0B9 1178 aaKnown RBP15.4■□□□□ 0.06
CNN1-202ENST00000535659 INTS10Q9NVR2 710 aaKnown RBP15.4■□□□□ 0.06
CNN1-202ENST00000535659 SLC6A14Q9UN76 642 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 VPS9D1Q9Y2B5 631 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 SPAG17Q6Q759 2223 aa15.4■□□□□ 0.06
CNN1-202ENST00000535659 TNRC6BQ9UPQ9 1833 aaKnown RBP15.4■□□□□ 0.06
CNN1-202ENST00000535659 CCDC151A5D8V7 595 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 CXorf49A8MYA2 514 aaPredicted RBP15.39■□□□□ 0.05
CNN1-202ENST00000535659 GPR89AB7ZAQ6 455 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 OR1I1O60431 355 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 PIAS1O75925 651 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 HAUS5O94927 633 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 AHSGP02765 367 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 FUCA1P04066 466 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 ABHD2P08910 425 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 GPR89BP0CG08 455 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 ZNF8P17098 575 aaPredicted RBP15.39■□□□□ 0.05
CNN1-202ENST00000535659 MPLP40238 635 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 NSG1P42857 185 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 SLC1A2P43004 574 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 LEPRP48357 1165 aaKnown RBP15.39■□□□□ 0.05
CNN1-202ENST00000535659 KBTBD12Q3ZCT8 623 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 RNF187Q5TA31 235 aaPredicted RBP15.39■□□□□ 0.05
CNN1-202ENST00000535659 PACS1Q6VY07 963 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 RASGEF1AQ8N9B8 481 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 UHMK1Q8TAS1 419 aaKnown RBP15.39■□□□□ 0.05
CNN1-202ENST00000535659 UBLCP1Q8WVY7 318 aaPredicted RBP15.39■□□□□ 0.05
CNN1-202ENST00000535659 SGF29Q96ES7 293 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 EPB41L4BQ9H329 900 aa15.39■□□□□ 0.05
CNN1-202ENST00000535659 ACSS3Q9H6R3 686 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms