RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 FKBPLQ9UIM3 349 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 MFHAS1Q9Y4C4 1052 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 FAM220BPB1ANY3 271 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 GABRDO14764 452 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 OGNP20774 298 aaKnown RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 SMYD5Q6GMV2 418 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 C10orf82Q8WW14 230 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 RIBC2Q9H4K1 309 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 FAM53CQ9NYF3 392 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 EDIL3O43854 480 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 FGBP02675 491 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 S100A6P06703 90 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 FAM46CQ5VWP2 391 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 CYP20A1Q6UW02 462 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 ISLR2Q6UXK2 745 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 CTU1Q7Z7A3 348 aaKnown RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 DSELQ8IZU8 1212 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 AMER2Q8N7J2 671 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 TSPAN14Q8NG11 270 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 HOPXQ9BPY8 73 aaPredicted RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 HS3ST4Q9Y661 456 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 MYH11P35749 1972 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 COL16A1Q07092 1604 aaPredicted RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 MSX2P35548 267 aaPredicted RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 MLLT6P55198 1093 aaPredicted RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 RPS24P62847 133 aaKnown RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 SLC10A7Q0GE19 358 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 TAF1AQ15573 450 aaPredicted RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 ZSWIM7Q19AV6 140 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 LSM12Q3MHD2 195 aaKnown RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 TYW3Q6IPR3 259 aaKnown RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 POLR1BQ9H9Y6 1135 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 PCDH12Q9NPG4 1184 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 GALNT8Q9NY28 637 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 CCDC59Q9P031 241 aaKnown RBP17.11■□□□□ 0.33
PHRF1-206ENST00000534320 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 ING4Q9UNL4 249 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 TIMM22Q9Y584 194 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 A0A1W2PQ67 120 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 CRATP43155 626 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 CAPZA2P47755 286 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 ABATP80404 500 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 CLCQ05315 142 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 LCP2Q13094 533 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 TPGS2Q68CL5 300 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 SEC14L1Q92503 715 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 EZH1Q92800 747 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 DGCR14Q96DF8 476 aaKnown RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 LENG8Q96PV6 779 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 FNIP2Q9P278 1114 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 SCML2Q9UQR0 700 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 DHRS12A0PJE2 317 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 CWF19L1Q69YN2 538 aaKnown RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 CHST9Q7L1S5 443 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 RAVER1Q8IY67 606 aaKnown RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 BORCS5Q969J3 196 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 ZNF317Q96PQ6 595 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 REEP1Q9H902 201 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 EGFL7Q9UHF1 273 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 CYTH4Q9UIA0 394 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 MSRAQ9UJ68 235 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 AKAP11Q9UKA4 1901 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 A0A1W2PRG6 482 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 ZNF487B1APH4 448 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 NPHS1O60500 1241 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 COL6A1P12109 1028 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 RFTN1Q14699 578 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 RELL1Q8IUW5 271 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 GPR156Q8NFN8 814 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 OR7A2PQ8NGA2 310 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 C8orf48Q96LL4 319 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 CCSER2Q9H7U1 834 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 NUDT4Q9NZJ9 180 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 CRNNQ9UBG3 495 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 GPR32O75388 356 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 CNMDO75829 334 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 IRF9Q00978 393 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 GALNT2Q10471 571 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 LPIN1Q14693 890 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 PDK3Q15120 406 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 PRKD1Q15139 912 aaPredicted RBP17.1■□□□□ 0.33
PHRF1-206ENST00000534320 PERM1Q5SV97 790 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 NELL1Q92832 810 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 OR52E6Q96RD3 313 aa17.1■□□□□ 0.33
PHRF1-206ENST00000534320 STAT5AP42229 794 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 AMIGO2Q86SJ2 522 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 DENND2DQ9H6A0 471 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-206ENST00000534320 PNPLA8Q9NP80 782 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 ZNF358Q9NW07 568 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 ARL5AQ9Y689 179 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 CACNA1SQ13698 1873 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 CCDC182A6NF36 153 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 PROZP22891 400 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 THOP1P52888 689 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 CNTD1Q8N815 330 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 CLP1Q92989 425 aaKnown RBP17.09■□□□□ 0.33
PHRF1-206ENST00000534320 ZNF599Q96NL3 588 aa17.09■□□□□ 0.33
PHRF1-206ENST00000534320 S100A14Q9HCY8 104 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms