RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 PURAQ00577 322 aaKnown RBP19.19■□□□□ 0.66
CAPN1-226ENST00000533820 GALNT1Q10472 559 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-226ENST00000533820 SLC14A2Q15849 920 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 RBBP7Q16576 425 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 FBXL22Q6P050 247 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 TBPL2Q6SJ96 375 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 CD300LGQ6UXG3 332 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 HACD2Q6Y1H2 254 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 VASH1Q7L8A9 365 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-226ENST00000533820 THAP11Q96EK4 314 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 ZYG11BQ9C0D3 744 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 PAIP1Q9H074 479 aaKnown RBP19.19■□□□□ 0.66
CAPN1-226ENST00000533820 MRGBPQ9NV56 204 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 SQORQ9Y6N5 450 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 TNFRSF10BO14763 440 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 CCT8P50990 548 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 AFMIDQ63HM1 303 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 KLHDC9Q8NEP7 349 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 PLGRKTQ9HBL7 147 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 ATP13A1Q9HD20 1204 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 ACTR3BQ9P1U1 418 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 TRPV2Q9Y5S1 764 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 BTN3A1O00481 513 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 BMP10O95393 424 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 OR1E1P30953 314 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 THPOP40225 353 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 FAM209AQ5JX71 171 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 DEPDC1Q5TB30 811 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 OGFOD2Q6N063 350 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 MRNIPQ6NTE8 343 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 GPR180Q86V85 440 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 DHRSXQ8N5I4 330 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 TRPV3Q8NET8 790 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 DUS3LQ96G46 650 aaKnown RBP19.19■□□□□ 0.66
CAPN1-226ENST00000533820 MYRFLQ96LU7 910 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 SERPINB11Q96P15 392 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 C9orf16Q9BUW7 83 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 LTB4R2Q9NPC1 389 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 SDR39U1Q9NRG7 319 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-226ENST00000533820 CATSPERZQ9NTU4 200 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 PADI3Q9ULW8 664 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 PRG3Q9Y2Y8 225 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-226ENST00000533820 ASB1Q9Y576 335 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 ASPDHA6ND91 283 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 AQP12BA6NM10 295 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 RPL9P32969 192 aaKnown RBP19.18■□□□□ 0.66
CAPN1-226ENST00000533820 PPP1R8Q12972 351 aaKnown RBP19.18■□□□□ 0.66
CAPN1-226ENST00000533820 ZNF235Q14590 738 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 ZBED5Q49AG3 693 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 BLOC1S3Q6QNY0 202 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 AQP12AQ8IXF9 295 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 KIAA2013Q8IYS2 634 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 MINDY1Q8N5J2 469 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 CDYL2Q8N8U2 506 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 OR4L1Q8NH43 312 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 ZUFSPQ96AP4 578 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 TMEM125Q96AQ2 219 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 PPM1MQ96MI6 270 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 ATOH8Q96SQ7 321 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 PKMYT1Q99640 499 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 ABCD2Q9UBJ2 740 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 BBIP1A8MTZ0 92 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 FAM155AB1AL88 458 aaPredicted RBP19.18■□□□□ 0.66
CAPN1-226ENST00000533820 K7EPI3 171 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 ACOX3O15254 700 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 ECI2O75521 394 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 MYF6P23409 242 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 ELK4P28324 431 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 TUBA4AP68366 448 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 KANK2Q63ZY3 851 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 ATAD1Q8NBU5 361 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 RMDN1Q96DB5 314 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 GPR21Q99679 349 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 SLC30A3Q99726 388 aa19.18■□□□□ 0.66
CAPN1-226ENST00000533820 NPLQ9BXD5 320 aaPredicted RBP19.18■□□□□ 0.66
CAPN1-226ENST00000533820 GPR39O43194 453 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 RAMP2O60895 175 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 WISP3O95389 354 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-226ENST00000533820 CYBBP04839 570 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 TCEA1P23193 301 aaKnown RBP19.17■□□□□ 0.66
CAPN1-226ENST00000533820 BNIP3Q12983 259 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 RAB39AQ14964 217 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 SLC36A3Q495N2 470 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 KCTD8Q6ZWB6 473 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 DCP1BQ8IZD4 617 aaKnown RBP19.17■□□□□ 0.66
CAPN1-226ENST00000533820 DDHD1Q8NEL9 900 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 ADAM2Q99965 735 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 SPON2Q9BUD6 331 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 OSBPL6Q9BZF3 934 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 CCDC68Q9H2F9 335 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 RPF2Q9H7B2 306 aaKnown RBP19.17■□□□□ 0.66
CAPN1-226ENST00000533820 CARD8Q9Y2G2 431 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 CCDC154A6NI56 674 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 B4GALT3O60512 393 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 HSD17B1P14061 328 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 OR4D2P58180 307 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 FAM110CQ1W6H9 321 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 LCN8Q6JVE9 175 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 LYSMD3Q7Z3D4 306 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 SYVN1Q86TM6 617 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms