RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SRPK1Q96SB4 655 aaKnown RBP10.32□□□□□ -0.76
CAPN1-225ENST00000533704 VAT1Q99536 393 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 FERMT1Q9BQL6 677 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 DESI2Q9BSY9 194 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 FICDQ9BVA6 458 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 FSD1LQ9BXM9 530 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 OSBPL8Q9BZF1 889 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 DPH1Q9BZG8 443 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 TRIM39Q9HCM9 518 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 PRDM8Q9NQV8 689 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 KLC4Q9NSK0 619 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 TRHDEQ9UKU6 1024 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 DNAJC16Q9Y2G8 782 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 PIKFYVEQ9Y2I7 2098 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 PRAMEF33A0A0G2JMD5 474 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 IGHV5-10-1A0A0J9YXX1 117 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 LOC285095A0A1B0GVY8 99 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 CCDC66A2RUB6 948 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 GRID2IPA4D2P6 1211 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 A8MU76 341 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 PDZK1P1A8MUH7 402 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 KCNN4O15554 427 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 PJA2O43164 708 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 DUX1O43812 170 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 PRAMEF10O60809 474 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 STK10O94804 968 aaKnown RBP10.31□□□□□ -0.76
CAPN1-225ENST00000533704 CDK14O94921 469 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 RBP3P10745 1247 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 SLC2A4P14672 509 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 FECHP22830 423 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 CSF2RBP32927 897 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 GEMP55040 296 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 COPS2P61201 443 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 CLN3Q13286 438 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 MPP3Q13368 585 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 XRCC4Q13426 336 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 GTF2H3Q13889 308 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 COL9A2Q14055 689 aaPredicted RBP10.31□□□□□ -0.76
CAPN1-225ENST00000533704 NR1D2Q14995 579 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 TGIF1Q15583 401 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 SLC1A5Q15758 541 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 ATP13A5Q4VNC0 1218 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 PDPK2PQ6A1A2 396 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 ITPRIPL1Q6GPH6 555 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 FAM151BQ6UXP7 276 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 ZNF574Q6ZN55 896 aaPredicted RBP10.31□□□□□ -0.76
CAPN1-225ENST00000533704 PEX26Q7Z412 305 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 GLT6D1Q7Z4J2 308 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 LRRTM4Q86VH4 590 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 TRAPPC5Q8IUR0 188 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 TRIM48Q8IWZ4 208 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 TTC30BQ8N4P2 665 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 OR10G6Q8NH81 332 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 TMEM159Q96B96 161 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 CALR3Q96L12 384 aaKnown RBP10.31□□□□□ -0.76
CAPN1-225ENST00000533704 APOL2Q9BQE5 337 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 TRABDQ9H4I3 376 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 HACD3Q9P035 362 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 TMEM9Q9P0T7 183 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 NFKBIL1Q9UBC1 381 aaPredicted RBP10.31□□□□□ -0.76
CAPN1-225ENST00000533704 TRIM10Q9UDY6 481 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 KLHL3Q9UH77 587 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 AMFRQ9UKV5 643 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 PCDHGA7Q9Y5G6 932 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 BPTFQ12830 3046 aa10.31□□□□□ -0.76
CAPN1-225ENST00000533704 A0A0U1RQJ8 604 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 TEX51A0A1B0GUA7 166 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 BTNL10A8MVZ5 291 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 KMOO15229 486 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 STX7O15400 261 aaKnown RBP10.3□□□□□ -0.76
CAPN1-225ENST00000533704 GPR39O43194 453 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 ANXA9O76027 345 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 TJP3O95049 919 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 FTCDO95954 541 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 AGTP01019 485 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 PRB1P04280 392 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 CCL4P13236 92 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 F3P13726 295 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 ZNF7P17097 686 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-225ENST00000533704 HLA-DPA1P20036 260 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 PSMB4P28070 264 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 CSTF2P33240 577 aaKnown RBP eCLIP10.3□□□□□ -0.76
CAPN1-225ENST00000533704 HMGCLP35914 325 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 SPAM1P38567 509 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 FASLGP48023 281 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 LIMK2P53671 638 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 GPLD1P80108 840 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 VAC14Q08AM6 782 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 KIF5AQ12840 1032 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 OLIG2Q13516 323 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 PRPSAP1Q14558 356 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 PTPRCAPQ14761 206 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 CHRNA6Q15825 494 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 KHDC1Q4VXA5 237 aaKnown RBP10.3□□□□□ -0.76
CAPN1-225ENST00000533704 TAF1BQ53T94 588 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-225ENST00000533704 TMEM164Q5U3C3 297 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 IYDQ6PHW0 289 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 CCDC81Q6ZN84 652 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 SLC9B2Q86UD5 537 aa10.3□□□□□ -0.76
CAPN1-225ENST00000533704 ZFAND4Q86XD8 727 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms