RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-208ENST00000533361 TARDBPQ13148 414 aaKnown RBP eCLIP22.01■■□□□ 1.11
SIPA1-208ENST00000533361 SEMA5AQ13591 1074 aa22.01■■□□□ 1.11
SIPA1-208ENST00000533361 PLA2G4EQ3MJ16 856 aa22.01■■□□□ 1.11
SIPA1-208ENST00000533361 LDLRAP1Q5SW96 308 aa22.01■■□□□ 1.11
SIPA1-208ENST00000533361 UNQ6494/PRO21346Q6UXR6 183 aa22.01■■□□□ 1.11
SIPA1-208ENST00000533361 LRRTM4Q86VH4 590 aa22.01■■□□□ 1.11
SIPA1-208ENST00000533361 Q8N9G6 341 aaPredicted RBP22.01■■□□□ 1.11
SIPA1-208ENST00000533361 LRIT1Q9P2V4 623 aa22.01■■□□□ 1.11
SIPA1-208ENST00000533361 TTC7AQ9ULT0 858 aaPredicted RBP22.01■■□□□ 1.11
SIPA1-208ENST00000533361 SNX12Q9UMY4 172 aa22.01■■□□□ 1.11
SIPA1-208ENST00000533361 TRBV23OR9-2A0A075B6M9 112 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 KMOO15229 486 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 GPR39O43194 453 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 LDB2O43679 373 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 SNX2O60749 519 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 SRP72O76094 671 aaKnown RBP22■■□□□ 1.11
SIPA1-208ENST00000533361 ECEL1O95672 775 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 AKT1P31749 480 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 ZNF140P52738 457 aaPredicted RBP22■■□□□ 1.11
SIPA1-208ENST00000533361 MAZP56270 477 aaKnown RBP22■■□□□ 1.11
SIPA1-208ENST00000533361 TRIP13Q15645 432 aaPredicted RBP22■■□□□ 1.11
SIPA1-208ENST00000533361 INSCQ1MX18 579 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 KHDC1Q4VXA5 237 aaKnown RBP22■■□□□ 1.11
SIPA1-208ENST00000533361 ZCCHC2Q9C0B9 1178 aaKnown RBP22■■□□□ 1.11
SIPA1-208ENST00000533361 OSGEPL1Q9H4B0 414 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 KLC4Q9NSK0 619 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 CRLS1Q9UJA2 301 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 SLC30A1Q9Y6M5 507 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 RNF215Q9Y6U7 377 aa22■■□□□ 1.11
SIPA1-208ENST00000533361 CCDC78A2IDD5 438 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 RHPN2P1A8MT19 583 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 CCL22O00626 93 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 GAPDHSO14556 408 aaPredicted RBP21.99■■□□□ 1.11
SIPA1-208ENST00000533361 SUN1O94901 812 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 GLB1P16278 677 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 MSH3P20585 1137 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 TERF1P54274 439 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 HLTFQ14527 1009 aaKnown RBP eCLIP21.99■■□□□ 1.11
SIPA1-208ENST00000533361 CERCAMQ5T4B2 595 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 GPRC6AQ5T6X5 926 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 TRAPPC5Q8IUR0 188 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 ARL14Q8N4G2 192 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 ACTRT1Q8TDG2 376 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 PATE1Q8WXA2 126 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 GATA6Q92908 595 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 DNAJC1Q96KC8 554 aaKnown RBP21.99■■□□□ 1.11
SIPA1-208ENST00000533361 DEPDC7Q96QD5 511 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 FAM96AQ9H5X1 160 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 FRYQ5TBA9 3013 aa21.99■■□□□ 1.11
SIPA1-208ENST00000533361 GOLGA6L10A0A0M3HER8 536 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 CHUKO15111 745 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 ZNF185O15231 689 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 KRT14P02533 472 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 ZNF7P17097 686 aaPredicted RBP21.98■■□□□ 1.11
SIPA1-208ENST00000533361 TCP1P17987 556 aaKnown RBP21.98■■□□□ 1.11
SIPA1-208ENST00000533361 ITGALP20701 1170 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 CA5AP35218 305 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 GRIA1P42261 906 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 VPS41P49754 854 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 SPIDRQ14159 915 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 KCTD19Q17RG1 926 aaPredicted RBP21.98■■□□□ 1.11
SIPA1-208ENST00000533361 CCDC38Q502W7 563 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 ZRANB3Q5FWF4 1079 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 NAGSQ8N159 534 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 DDHD1Q8NEL9 900 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 WDR48Q8TAF3 677 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 STYXQ8WUJ0 223 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 NLE1Q9NVX2 485 aaPredicted RBP21.98■■□□□ 1.11
SIPA1-208ENST00000533361 RABGEF1Q9UJ41 708 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 DNAJC16Q9Y2G8 782 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.98■■□□□ 1.11
SIPA1-208ENST00000533361 PLXNB3Q9ULL4 1909 aa21.98■■□□□ 1.11
SIPA1-208ENST00000533361 ARHGEF17Q96PE2 2063 aaPredicted RBP21.97■■□□□ 1.11
SIPA1-208ENST00000533361 ASXL3Q9C0F0 2248 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 TRABD2BA6NFA1 517 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 CES2O00748 559 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 RPLP0P05388 317 aaKnown RBP21.97■■□□□ 1.11
SIPA1-208ENST00000533361 MC4RP32245 332 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 COILP38432 576 aaPredicted RBP21.97■■□□□ 1.11
SIPA1-208ENST00000533361 CCL7P80098 99 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 XIAPP98170 497 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 NFATC2Q13469 925 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 LAMB3Q13751 1172 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 SKIDA1Q1XH10 827 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 CDCP2Q5VXM1 449 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 TTC27Q6P3X3 843 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 CCDC137Q6PK04 289 aaKnown RBP21.97■■□□□ 1.11
SIPA1-208ENST00000533361 TMEM220Q6QAJ8 160 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 TAS2R42Q7RTR8 314 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 DCBLD1Q8N8Z6 715 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 ULK4Q96C45 1275 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 GFM1Q96RP9 751 aaKnown RBP21.97■■□□□ 1.11
SIPA1-208ENST00000533361 TBC1D29Q9UFV1 150 aa21.97■■□□□ 1.11
SIPA1-208ENST00000533361 HEATR9A2RTY3 570 aa21.96■■□□□ 1.11
SIPA1-208ENST00000533361 NUDT21O43809 227 aaKnown RBP21.96■■□□□ 1.11
SIPA1-208ENST00000533361 CSO75390 466 aaKnown RBP21.96■■□□□ 1.11
SIPA1-208ENST00000533361 SLC2A4P14672 509 aa21.96■■□□□ 1.11
SIPA1-208ENST00000533361 VCLP18206 1134 aa21.96■■□□□ 1.11
SIPA1-208ENST00000533361 PPM1FP49593 454 aaPredicted RBP21.96■■□□□ 1.11
SIPA1-208ENST00000533361 GPS1Q13098 491 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms