RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SLC35G6P0C7Q6 338 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 ZC3H14Q6PJT7 736 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 APTXQ7Z2E3 356 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 FAM129CQ86XR2 697 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 FUKQ8N0W3 1084 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 LMX1AQ8TE12 382 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 NELL1Q92832 810 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 NTAN1Q96AB6 310 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 MARK4Q96L34 752 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 PRICKLE1Q96MT3 831 aaPredicted RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 ARHGAP9Q9BRR9 750 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 CCDC177Q9NQR7 707 aaPredicted RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SUSD2Q9UGT4 822 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 COQ4Q9Y3A0 265 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 NHSL1Q5SYE7 1610 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 TNFAIP8O95379 198 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 KRT75O95678 551 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 CTSAP10619 480 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 COX4I1P13073 169 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 AVPR1BP47901 424 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 WDR5P61964 334 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 TRIM71Q2Q1W2 868 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 GPAT3Q53EU6 434 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 RNF43Q68DV7 783 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 CDC73Q6P1J9 531 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 OR2AP1Q8NGE2 309 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 RORBQ92753 470 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 PWWP2AQ96N64 755 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 DNAJC11Q9NVH1 559 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SUCOQ9UBS9 1254 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 CYP8B1Q9UNU6 501 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 ANGPT4Q9Y264 503 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 BTRCQ9Y297 605 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 H3BQ06 376 aaPredicted RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 MYL12BO14950 172 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 AZIN1O14977 448 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 FFAR2O15552 330 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 TPSB2P20231 275 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 RPL6Q02878 288 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 TAF1AQ15573 450 aaPredicted RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 TPSAB1Q15661 275 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 INO80DQ53TQ3 878 aaPredicted RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 IRF2BP1Q8IU81 584 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 FAM20CQ8IXL6 584 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SMG8Q8ND04 991 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF248Q8NDW4 579 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SPATA22Q8NHS9 363 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SMOC2Q9H3U7 446 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 RHOJQ9H4E5 214 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 MYRFQ9Y2G1 1151 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 DNAJC25-GNG10A0A024R161 153 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 RGSL1A5PLK6 1076 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 NPEPPSL1A6NEC2 478 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 C9J4A7 227 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 M0R2N6 131 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 AP2A1O95782 977 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 AGXTP21549 392 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 NDUFS1P28331 727 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 SCNN1AP37088 669 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 PPP1R14AQ96A00 147 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 KLHDC7BQ96G42 594 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 RAB11FIP5Q9BXF6 653 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 OSBPL2Q9H1P3 480 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 PNPLA8Q9NP80 782 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 GNEQ9Y223 722 aaKnown RBP11.21□□□□□ -0.61
PTPRK-221ENST00000532331 BACE2Q9Y5Z0 518 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 PIRO00625 290 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 MRPS22P82650 360 aaKnown RBP11.21□□□□□ -0.61
PTPRK-221ENST00000532331 EPS8Q12929 822 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 BNIPLQ7Z465 357 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 ZC3H7AQ8IWR0 971 aaKnown RBP11.21□□□□□ -0.61
PTPRK-221ENST00000532331 ADGRG2Q8IZP9 1017 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 C19orf18Q8NEA5 215 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 PIGKQ92643 395 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 TBATAQ96M53 351 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 PAPOLBQ9NRJ5 636 aaKnown RBP11.21□□□□□ -0.61
PTPRK-221ENST00000532331 ADAMTS5Q9UNA0 930 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 NWD2Q9ULI1 1742 aa11.21□□□□□ -0.61
PTPRK-221ENST00000532331 SRRM3A6NNA2 597 aaPredicted RBP11.21□□□□□ -0.62
PTPRK-221ENST00000532331 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.62
PTPRK-221ENST00000532331 MASP1P48740 699 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 DUSP3P51452 185 aaPredicted RBP11.21□□□□□ -0.62
PTPRK-221ENST00000532331 LAPTM5Q13571 262 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 LSM12Q3MHD2 195 aaKnown RBP11.21□□□□□ -0.62
PTPRK-221ENST00000532331 ALKBH2Q6NS38 261 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 COMMD2Q86X83 199 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 RASGEF1CQ8N431 466 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 TEKT5Q96M29 485 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 SEMA6AQ9H2E6 1030 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 SERHL2Q9H4I8 314 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 SERHLQ9NQF3 203 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 VPS4AQ9UN37 437 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 LRCH1Q9Y2L9 728 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 LINC00854A0A1B0GVQ3 168 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 ADAMTS3O15072 1205 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 ACP5P13686 325 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 TSPAN8P19075 237 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 CACNA2D1P54289 1103 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 NAE1Q13564 534 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 DGKKQ5KSL6 1271 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms