RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 A0A0U1RQF3 1178 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 TCRBV7S3A2A0A539 114 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 ELOVL7A1L3X0 281 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 TYW5A2RUC4 315 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 KLRF2D3W0D1 207 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 PTGESO14684 152 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 ATP2A1O14983 1001 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 CLDN3O15551 220 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 B4GALT3O60512 393 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 TSPAN1O60635 241 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 CRCPO75575 148 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 RAD51DO75771 328 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 CDKL5O76039 1030 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 KRT6BP04259 564 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 MMP2P08253 660 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 DANCRP0C864 163 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 TPBGLP0DKB5 382 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 HSPA5P11021 654 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 APEHP13798 732 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 ETFAP13804 333 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 AKR1A1P14550 325 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 AREGP15514 252 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 UBA1P22314 1058 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 ITPKBP27987 946 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 PBLDP30039 288 aaPredicted RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 WNT5AP41221 380 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 RAP1GAPP47736 663 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 ARCN1P48444 511 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 KRT6CP48668 564 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 VPS41P49754 854 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 CLCNKBP51801 687 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 COX10Q12887 443 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 NAE1Q13564 534 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 PNLIPRP3Q17RR3 467 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 LRRC23Q53EV4 343 aaPredicted RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 SPATA46Q5T0L3 261 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 TXNRD3NBQ6F5E7 133 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 AFTPHQ6ULP2 937 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 VSTM1Q6UX27 236 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 QSOX2Q6ZRP7 698 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 TOM1L2Q6ZVM7 507 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 LPCAT2Q7L5N7 544 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 POLNQ7Z5Q5 900 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 SYVN1Q86TM6 617 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 IGFN1Q86VF2 1251 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 RFX6Q8HWS3 928 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 UEVLDQ8IX04 471 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 ZDHHC23Q8IYP9 409 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 LGI4Q8N135 537 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 PAPD5Q8NDF8 572 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 SLC24A4Q8NFF2 622 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 HUS1BQ8NHY5 278 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 EXOC6Q8TAG9 804 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 MYCBPAPQ8TBZ2 947 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 TAS1R2Q8TE23 839 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 CELF1Q92879 486 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 SLAMF9Q96A28 289 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 RAB7BQ96AH8 199 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 RNF183Q96D59 192 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 MSI2Q96DH6 328 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 CFAP36Q96G28 342 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 ZC3HAV1LQ96H79 300 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 CNDP1Q96KN2 507 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 EGLN2Q96KS0 407 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 UROC1Q96N76 676 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 OR14A2Q96R54 314 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 ZNF347Q96SE7 839 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 SLX1AQ9BQ83 275 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 WDR83Q9BRX9 315 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 NTPCRQ9BSD7 190 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 MOV10L1Q9BXT6 1211 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 NUF2Q9BZD4 464 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 OSBPL8Q9BZF1 889 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 PPIL3Q9H2H8 161 aaKnown RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 FN3KQ9H479 309 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 LMAN1LQ9HAT1 526 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 CHMP1AQ9HD42 196 aaPredicted RBP4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 DUSP22Q9NRW4 184 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 TFCP2L1Q9NZI6 479 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 TRPM5Q9NZQ8 1165 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 SPASTQ9UBP0 616 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 CTNNAL1Q9UBT7 734 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 KCNN3Q9UGI6 736 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 POLLQ9UGP5 575 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 ITM2BQ9Y287 266 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 PLEKHA6Q9Y2H5 1048 aa4.3□□□□□ -1.72
AC055878.1-201ENST00000531858 A0A0B4J293 547 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 A0A1W2PPM1 405 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 C17orf102A2RUQ5 167 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CPED1A4D0V7 1026 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 FAM149AA5PLN7 773 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 ARHGAP42A6NI28 874 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CGB1A6NKQ9 187 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 HSPB2A8KAH6 182 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 IFNL4K9M1U5 179 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 CASQ2O14958 399 aaPredicted RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 SPAG6O75602 509 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 IDH1O75874 414 aaKnown RBP4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 PGLSO95336 258 aa4.29□□□□□ -1.72
AC055878.1-201ENST00000531858 MT-CO3P00414 261 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms