RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 DPP6P42658 865 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 SNAP25P60880 206 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 PSMC6P62333 389 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 MPP1Q00013 466 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 NAA25Q14CX7 972 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 CDC37Q16543 378 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-212ENST00000529046 NFIL3Q16649 462 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 ZNF667Q5HYK9 610 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 TMEM71Q6P5X7 295 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 FAM83HQ6ZRV2 1179 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-212ENST00000529046 DPP10Q8N608 796 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 PLD5Q8N7P1 536 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 TEX45Q8NA69 505 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 ENGASEQ8NFI3 743 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 TMEM174Q8WUU8 243 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 RFFLQ8WZ73 363 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 INPP5DQ92835 1189 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 APOPT1Q96IL0 206 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 TAAR1Q96RJ0 339 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 CTAGE1Q96RT6 745 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 FAM234AQ9H0X4 552 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 KAT14Q9H8E8 782 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 ENTPD7Q9NQZ7 604 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 PXMP2Q9NR77 195 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 MTCH2Q9Y6C9 303 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 SCN10AQ9Y5Y9 1956 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 MCM3APO60318 1980 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 MUC3AQ02505 3323 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 IGLV5-39A0A0G2JS06 123 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 TMEM272A0A1B0GTI8 110 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 PABPN1LA6NDY0 278 aaKnown RBP4.91□□□□□ -1.62
CSDE1-212ENST00000529046 KLRF2D3W0D1 207 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 HSPB6O14558 160 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 TMEM63AO94886 807 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 IGHDP01880 384 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 MMP3P08254 477 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 CD72P21854 359 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 GNLYP22749 145 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 CALML3P27482 149 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 ABCD3P28288 659 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 ICAM3P32942 547 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 RYKP34925 604 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 DDIT3P35638 169 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 POLD2P49005 469 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 ARSFP54793 590 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 CDH15P55291 814 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 HAND2P61296 217 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 ARHGAP1Q07960 439 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 GPNMBQ14956 572 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 GPR68Q15743 365 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 QRICH1Q2TAL8 776 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 CELF3Q5SZQ8 465 aaKnown RBP4.91□□□□□ -1.62
CSDE1-212ENST00000529046 ARHGEF16Q5VV41 709 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 NCAPH2Q6IBW4 605 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 PARM1Q6UWI2 310 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 H1FNTQ75WM6 255 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-212ENST00000529046 RPAINQ86UA6 219 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 RBFAQ8N0V3 343 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 RRP36Q96EU6 259 aaKnown RBP4.91□□□□□ -1.62
CSDE1-212ENST00000529046 ZNF419Q96HQ0 510 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-212ENST00000529046 RAD9AQ99638 391 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 UBAC1Q9BSL1 405 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 UBA5Q9GZZ9 404 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 PREBQ9HCU5 417 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 DIAPH3Q9NSV4 1193 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 TBC1D14Q9P2M4 693 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 MAD2L2Q9UI95 211 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 LCTP09848 1927 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 NEDD4P46934 1319 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 FRMPD4Q14CM0 1322 aa4.91□□□□□ -1.62
CSDE1-212ENST00000529046 B4E171 279 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 TNFSF14O43557 240 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 CEP104O60308 925 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 GJB5O95377 273 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 CA3P07451 260 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 GOLGA8HP0CJ92 632 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 ENO3P13929 434 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-212ENST00000529046 CHRNB2P17787 502 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 CTPS1P17812 591 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 DCTDP32321 178 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 ARL1P40616 181 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-212ENST00000529046 TSPAN7P41732 249 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 GPR12P47775 334 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 SELENOVP59797 346 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 CYP4A11Q02928 519 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 GAD2Q05329 585 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 TROAPQ12815 778 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 TRDNQ13061 729 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 NEDD9Q14511 834 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 PTGISQ16647 500 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 ODF3L2Q3SX64 289 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 USH1GQ495M9 461 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 MANEAQ5SRI9 462 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 NUGGCQ68CJ6 796 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 ACAD10Q6JQN1 1059 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 HMBOX1Q6NT76 420 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 CWC27Q6UX04 472 aaKnown RBP4.9□□□□□ -1.63
CSDE1-212ENST00000529046 IL20RBQ6UXL0 311 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 C9orf47Q6ZRZ4 202 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 B4GALNT4Q76KP1 1039 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms