RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 GALK2Q01415 458 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 TYSND1Q2T9J0 566 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 UGT3A2Q3SY77 523 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 TRIM60Q495X7 471 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 RBM20Q5T481 1227 aaKnown RBP12.41□□□□□ -0.42
TSKU-203ENST00000527881 ATF7IP2Q5U623 682 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 ESRP1Q6NXG1 681 aaKnown RBP12.41□□□□□ -0.42
TSKU-203ENST00000527881 PDZD4Q76G19 769 aaPredicted RBP12.41□□□□□ -0.42
TSKU-203ENST00000527881 GRAMD2AQ8IUY3 354 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 CLYBLQ8N0X4 340 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 TWIST2Q8WVJ9 160 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 VPS35Q96QK1 796 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 KCNA7Q96RP8 456 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 RNF146Q9NTX7 359 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 INTS7Q9NVH2 962 aaKnown RBP12.41□□□□□ -0.42
TSKU-203ENST00000527881 COMMD8Q9NX08 183 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 USE1Q9NZ43 259 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 A0A087X1B8 175 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 AGAP5A6NIR3 686 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 SSX4O60224 188 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 NDST3O95803 873 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 MTPNP58546 118 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 SELPLGQ14242 412 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 FAM98CQ17RN3 349 aaKnown RBP12.41□□□□□ -0.42
TSKU-203ENST00000527881 FBXO48Q5FWF7 155 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 ARHGAP17Q68EM7 881 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 SULT1C3Q6IMI6 304 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 NAPEPLDQ6IQ20 393 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 AMER2Q8N7J2 671 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 FRS2Q8WU20 508 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 NDRG1Q92597 394 aaKnown RBP12.41□□□□□ -0.42
TSKU-203ENST00000527881 GPRASP2Q96D09 838 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 GPR78Q96P69 363 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 LPIN3Q9BQK8 851 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 SLIRPQ9GZT3 109 aaKnown RBP12.41□□□□□ -0.42
TSKU-203ENST00000527881 ATXN3LQ9H3M9 355 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 TMEM134Q9H6X4 195 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 CASS4Q9NQ75 786 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 SNX6Q9UNH7 406 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 TCRBV5S2A0A599 114 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 UBFD1O14562 309 aaKnown RBP12.4□□□□□ -0.42
TSKU-203ENST00000527881 AIREO43918 545 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 PRKD3O94806 890 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 MT-ND2P03891 347 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 RBP1P09455 135 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 RAP2AP10114 183 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 SLC1A2P43004 574 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 GLUD2P49448 558 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 HSPA2P54652 639 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 PPP2R2BQ00005 443 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 AMHR2Q16671 573 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 PAGE3Q5JUK9 113 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 ARMC4Q5T2S8 1044 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 LINC00299Q6ZSB3 139 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 OR5H6Q8NGV6 325 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 OR6B3Q8NGW1 331 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 OR6F1Q8NGZ6 308 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 TP53INP1Q96A56 240 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 NTN4Q9HB63 628 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 AASDHPPTQ9NRN7 309 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 COQ3Q9NZJ6 369 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 EHD3Q9NZN3 535 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 PCDHA9Q9Y5H5 950 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.4□□□□□ -0.42
TSKU-203ENST00000527881 LACTBL1A8MY62 500 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 PPP6CO00743 305 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 AP3D1O14617 1153 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 CYP7B1O75881 506 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 DNAJB5O75953 348 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 LTA4HP09960 611 aaKnown RBP12.4□□□□□ -0.42
TSKU-203ENST00000527881 SERPINH1P50454 418 aaKnown RBP12.4□□□□□ -0.42
TSKU-203ENST00000527881 DNAJB13P59910 316 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 SOWAHAQ2M3V2 549 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 CRY2Q49AN0 593 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 MPZL3Q6UWV2 235 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 ABHD15Q6UXT9 468 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 RAB44Q7Z6P3 723 aaPredicted RBP12.4□□□□□ -0.42
TSKU-203ENST00000527881 VSIG10LQ86VR7 867 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 PROSER1Q86XN7 944 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 SLC22A9Q8IVM8 553 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 MFSD6LQ8IWD5 586 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 SLC43A3Q8NBI5 491 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 ZNF280CQ8ND82 737 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 GIPC2Q8TF65 315 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 NACC2Q96BF6 587 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 MUC13Q9H3R2 512 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 RUBCNLQ9H714 662 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 RASSF1Q9NS23 344 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 SNX8Q9Y5X2 465 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 PRMT5O14744 637 aaPredicted RBP12.4□□□□□ -0.42
TSKU-203ENST00000527881 MSCO60682 206 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 RECQL5O94762 991 aaPredicted RBP12.4□□□□□ -0.42
TSKU-203ENST00000527881 SIX3O95343 332 aaPredicted RBP12.4□□□□□ -0.42
TSKU-203ENST00000527881 ANXA6P08133 673 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 GRM1Q13255 1194 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 FSCN1Q16658 493 aaKnown RBP12.4□□□□□ -0.42
TSKU-203ENST00000527881 DENND5AQ6IQ26 1287 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 BEND5Q7L4P6 421 aa12.4□□□□□ -0.42
TSKU-203ENST00000527881 OR52K2Q8NGK3 314 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms