RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 VPS51Q9UID3 782 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 SLC30A1Q9Y6M5 507 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 CARNS1A5YM72 827 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 NR5A2O00482 541 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 TXNDC9O14530 226 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 DNAJA2O60884 412 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 RNASEH2AO75792 299 aaKnown RBP15.21■□□□□ 0.03
USH1C-207ENST00000527720 LINC00032P0C843 101 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 SLC7A1P30825 629 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 RPS6KA2Q15349 733 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 XKR7Q5GH72 579 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 C6orf10Q5SRN2 563 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 ARMC12Q5T9G4 340 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 IL23RQ5VWK5 629 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 CNKSR3Q6P9H4 555 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 FBXL19Q6PCT2 694 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 UGT2A3Q6UWM9 527 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 DEFB128Q7Z7B8 93 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 RETREG3Q86VR2 466 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 SLC39A11Q8N1S5 342 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 CHCHD4Q8N4Q1 142 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 ZUFSPQ96AP4 578 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 MYO19Q96H55 970 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 UHRF1Q96T88 793 aaPredicted RBP15.21■□□□□ 0.03
USH1C-207ENST00000527720 HGH1Q9BTY7 390 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 GPR63Q9BZJ6 419 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 PCDHAC1Q9H158 963 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 SMPD4Q9NXE4 827 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 MAP10Q9P2G4 905 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 DHRS7Q9Y394 339 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 PCDHB9Q9Y5E1 797 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 GPR45Q9Y5Y3 372 aa15.21■□□□□ 0.03
USH1C-207ENST00000527720 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.2■□□□□ 0.02
USH1C-207ENST00000527720 PRMT5O14744 637 aaPredicted RBP15.2■□□□□ 0.02
USH1C-207ENST00000527720 GREM1O60565 184 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 PGLSO95336 258 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 RPS3P23396 243 aaKnown RBP eCLIP15.2■□□□□ 0.02
USH1C-207ENST00000527720 MAPK8P45983 427 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 CLCN7P51798 805 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 SLC7A2P52569 658 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 ATXN3P54252 364 aaPredicted RBP15.2■□□□□ 0.02
USH1C-207ENST00000527720 RALGDSQ12967 914 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 CDH18Q13634 790 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 SPOUT1Q5T280 376 aaKnown RBP15.2■□□□□ 0.02
USH1C-207ENST00000527720 RETSATQ6NUM9 610 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 BLOC1S3Q6QNY0 202 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 TAS2R42Q7RTR8 314 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 ITIH5Q86UX2 942 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 DHFR2Q86XF0 187 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 ATP6V1E2Q96A05 226 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 ZNF382Q96SR6 550 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 PAK6Q9NQU5 681 aaPredicted RBP15.2■□□□□ 0.02
USH1C-207ENST00000527720 PTGDR2Q9Y5Y4 395 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 CYBBP04839 570 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 URODP06132 367 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 HSD17B1P14061 328 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 CSKP41240 450 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 CSNK1DP48730 415 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 TLR1Q15399 786 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 EML3Q32P44 896 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 LAYNQ6UX15 382 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 SYVN1Q86TM6 617 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 METTL3Q86U44 580 aaKnown RBP15.2■□□□□ 0.02
USH1C-207ENST00000527720 CPNE9Q8IYJ1 553 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 SNX31Q8N9S9 440 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 GOLM1Q8NBJ4 401 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 PHC3Q8NDX5 983 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 GRIN3AQ8TCU5 1115 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 ADAMTS19Q8TE59 1207 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 PIH1D2Q8WWB5 315 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 TSC22D3Q99576 134 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 CENPKQ9BS16 269 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 C2orf49Q9BVC5 232 aaPredicted RBP15.2■□□□□ 0.02
USH1C-207ENST00000527720 TRIM15Q9C019 465 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 RIC8BQ9NVN3 520 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 AIG1Q9NVV5 245 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 CD274Q9NZQ7 290 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 BTRCQ9Y297 605 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 FCF1Q9Y324 198 aaKnown RBP15.2■□□□□ 0.02
USH1C-207ENST00000527720 TNPO3Q9Y5L0 923 aaKnown RBP15.2■□□□□ 0.02
USH1C-207ENST00000527720 INSL5Q9Y5Q6 135 aa15.2■□□□□ 0.02
USH1C-207ENST00000527720 A0A1B0GTL3 188 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 E2F3O00716 465 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 CAPN3P20807 821 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 AGTR2P50052 363 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 HK3P52790 923 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 BNIP2Q12982 314 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 TGFBIQ15582 683 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 RBBP7Q16576 425 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 GPRIN3Q6ZVF9 776 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 ADAMTSL2Q86TH1 951 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 ACDQ96AP0 544 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 BRINP2Q9C0B6 783 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 SLC52A3Q9NQ40 469 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 LSM7Q9UK45 103 aaKnown RBP15.19■□□□□ 0.02
USH1C-207ENST00000527720 OGDHLQ9ULD0 1010 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 C15orf38-AP3S2A0A0A6YYH1 394 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 NCF1BA6NI72 391 aaPredicted RBP15.19■□□□□ 0.02
USH1C-207ENST00000527720 NCF1CA8MVU1 366 aaPredicted RBP15.19■□□□□ 0.02
USH1C-207ENST00000527720 NCF1P14598 390 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms