RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 KCTD11Q693B1 232 aa26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 DENND5AQ6IQ26 1287 aa26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 LRRTM4Q86VH4 590 aa26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 SFRP1Q8N474 314 aa26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 WDR36Q8NI36 951 aaKnown RBP26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 GDAP1Q8TB36 358 aa26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 FGF11Q92914 225 aa26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 TMEM74Q96NL1 305 aa26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 TBC1D29Q9UFV1 150 aa26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 SATB2Q9UPW6 733 aa26.03■■□□□ 1.76
TSPAN4-217ENST00000527644 GOLGA6L3A6NEY3 463 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 PPM1DO15297 605 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 PSMD3O43242 534 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 CRTAMO95727 393 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 SLC2A4P14672 509 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 ALDH4A1P30038 563 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 FASLGP48023 281 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 INHBCP55103 352 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 OR1D5P58170 312 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 TMEM115Q12893 351 aaPredicted RBP26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 SPARCL1Q14515 664 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 OASLQ15646 514 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 C3orf38Q5JPI3 329 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 IYDQ6PHW0 289 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 IGF2-ASQ6U949 168 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 LIN37Q96GY3 246 aaPredicted RBP26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 ZNF578Q96N58 590 aaPredicted RBP26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 STRADBQ9C0K7 418 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 LRRC40Q9H9A6 602 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 ATXN7L1Q9ULK2 861 aaPredicted RBP26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 PCDHGA8Q9Y5G5 932 aa26.02■■□□□ 1.76
TSPAN4-217ENST00000527644 CCDC187A0A096LP49 1063 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 GAPDHSO14556 408 aaPredicted RBP26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 TLX3O43711 291 aaPredicted RBP26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 UGT1A9O60656 530 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 EML2O95834 649 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 UGT1A6P19224 532 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 UGT1A1P22309 533 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 UGT1A4P22310 534 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 CCKBRP32239 447 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 UGT1A3P35503 534 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 UGT1A5P35504 534 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 GTF2H3Q13889 308 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 PTPRCAPQ14761 206 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 CLPPQ16740 277 aaPredicted RBP26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 KHDC1Q4VXA5 237 aaKnown RBP26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 LDLRAP1Q5SW96 308 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 CRTC3Q6UUV7 619 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 B3GNT8Q7Z7M8 397 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 OR4K2Q8NGD2 314 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 SNIP1Q8TAD8 396 aaKnown RBP26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 SLC37A2Q8TED4 501 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 TTC25Q96NG3 672 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 C19orf43Q9BQ61 176 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 TIMM29Q9BSF4 260 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 ZCCHC2Q9C0B9 1178 aaKnown RBP26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 UGT1A7Q9HAW7 530 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 UGT1A10Q9HAW8 530 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 UGT1A8Q9HAW9 530 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 KLC4Q9NSK0 619 aa26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 DSPP15924 2871 aaKnown RBP26.01■■□□□ 1.75
TSPAN4-217ENST00000527644 TRBV23OR9-2A0A075B6M9 112 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 A0A087WV48 116 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 A0A1W2PNU3 283 aaPredicted RBP26■■□□□ 1.75
TSPAN4-217ENST00000527644 A6NCN8 305 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 OR5K4A6NMS3 321 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 SNX2O60749 519 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 CPNE6O95741 557 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 F3P13726 295 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 ZNF7P17097 686 aaPredicted RBP26■■□□□ 1.75
TSPAN4-217ENST00000527644 ZFP36L1Q07352 338 aaKnown RBP26■■□□□ 1.75
TSPAN4-217ENST00000527644 EIF3IQ13347 325 aaKnown RBP26■■□□□ 1.75
TSPAN4-217ENST00000527644 INSCQ1MX18 579 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 ZNF547Q8IVP9 402 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 DDHD1Q8NEL9 900 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 ZNF398Q8TD17 642 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 C1orf54Q8WWF1 131 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 FOXP3Q9BZS1 431 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 EPB41L5Q9HCM4 733 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 SMOXQ9NWM0 555 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 SLC23A2Q9UGH3 650 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 ZNF148Q9UQR1 794 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 KCTD3Q9Y597 815 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 LAMA5O15230 3695 aa26■■□□□ 1.75
TSPAN4-217ENST00000527644 CELSR3Q9NYQ7 3312 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 KIR2DS5A0A0G2JLQ3 304 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 A0A0G2JNG1 304 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 KIR2DS3K7RE56 304 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 RBMS1P29558 406 aaKnown RBP25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 ERVPABLB-1P60509 514 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 KIR2DS5Q14953 304 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 AMZ1Q400G9 498 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 PIM3Q86V86 326 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 SLC46A1Q96NT5 459 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 TLR10Q9BXR5 811 aa25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 STN1Q9H668 368 aaKnown RBP25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 SARS2Q9NP81 518 aaKnown RBP25.99■■□□□ 1.75
TSPAN4-217ENST00000527644 PRAMEF1O95521 474 aa25.98■■□□□ 1.75
TSPAN4-217ENST00000527644 AP2A1O95782 977 aa25.98■■□□□ 1.75
TSPAN4-217ENST00000527644 CD1CP29017 333 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms