RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 NUAK1O60285 661 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 MTX2O75431 263 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 GPR89BP0CG08 455 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CTSEP14091 401 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 ZNF8P17098 575 aaPredicted RBP12.79□□□□□ -0.36
SMPD1-202ENST00000526280 NMBRP28336 390 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 GRK6P43250 576 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 GNPDA1P46926 289 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CACNG1Q06432 222 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 TMEM115Q12893 351 aaPredicted RBP12.79□□□□□ -0.36
SMPD1-202ENST00000526280 C1orf61Q13536 156 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 ELOCQ15369 112 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 PYCR3Q53H96 274 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 ZRANB3Q5FWF4 1079 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 FNBP1LQ5T0N5 605 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 GPRC6AQ5T6X5 926 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 MICALCLQ6ZW33 695 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 MARK2Q7KZI7 788 aaKnown RBP12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CTAGE6Q86UF2 777 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 AGGF1Q8N302 714 aaeCLIP12.79□□□□□ -0.36
SMPD1-202ENST00000526280 SDR16C5Q8N3Y7 309 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 BBOF1Q8ND07 529 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 GDAP1Q8TB36 358 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 ULK4Q96C45 1275 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 SGSM3Q96HU1 749 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 SIGLEC10Q96LC7 697 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CAMK1GQ96NX5 476 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 LRRC1Q9BTT6 524 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 TMEM168Q9H0V1 697 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 FAM96AQ9H5X1 160 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 TRNAU1APQ9NX07 287 aaKnown RBP12.79□□□□□ -0.36
SMPD1-202ENST00000526280 WHRNQ9P202 907 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 ZNHIT2Q9UHR6 403 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 PCOLCE2Q9UKZ9 415 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 UTP11Q9Y3A2 253 aaKnown RBP12.79□□□□□ -0.36
SMPD1-202ENST00000526280 PCYT1BQ9Y5K3 369 aaPredicted RBP12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CNOT1A5YKK6 2376 aaKnown RBP12.78□□□□□ -0.36
SMPD1-202ENST00000526280 FAM237BA0A1B0GVD1 139 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 OR51F1A6NGY5 319 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 TRIM38O00635 465 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 TPP1O14773 563 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 NDC80O14777 642 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 YY2O15391 372 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 CBFA2T3O75081 653 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 CDK14O94921 469 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 CELA2BP08218 269 aaPredicted RBP12.78□□□□□ -0.36
SMPD1-202ENST00000526280 CSRP1P21291 193 aaKnown RBP12.78□□□□□ -0.36
SMPD1-202ENST00000526280 FOXN2P32314 431 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 CDKN1CP49918 316 aaPredicted RBP12.78□□□□□ -0.36
SMPD1-202ENST00000526280 PRAMEP78395 509 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 INAVAQ3KP66 663 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 C8orf74Q6P047 294 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 CASC4Q6P4E1 433 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 LVRNQ6Q4G3 990 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 AFTPHQ6ULP2 937 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 GALNT13Q8IUC8 556 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 PIANPQ8IYJ0 282 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 NXPE1Q8N323 547 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 EID2Q8N6I1 236 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 CEP112Q8N8E3 955 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 NOA1Q8NC60 698 aaKnown RBP12.78□□□□□ -0.36
SMPD1-202ENST00000526280 OR6P1Q8NGX9 317 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 OR4L1Q8NH43 312 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 OR4C6Q8NH72 309 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 GPBAR1Q8TDU6 330 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 RHBDD1Q8TEB9 315 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 MFSD3Q96ES6 412 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 OR2M4Q96R27 311 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 RAB17Q9H0T7 212 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 DPH5Q9H2P9 285 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 NLGN3Q9NZ94 848 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 SAMD15Q9P1V8 674 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 CRLS1Q9UJA2 301 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 GPSM3Q9Y4H4 160 aa12.78□□□□□ -0.36
SMPD1-202ENST00000526280 FFAR2O15552 330 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 GRID2O43424 1007 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 GOT2P00505 430 aaKnown RBP12.77□□□□□ -0.37
SMPD1-202ENST00000526280 ANXA6P08133 673 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 PRSS56P0CW18 603 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 ACRV1P26436 265 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 ARNTP27540 789 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 DRG2P55039 364 aaKnown RBP12.77□□□□□ -0.37
SMPD1-202ENST00000526280 CTBSQ01459 385 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 SLC7A5Q01650 507 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 DHX9Q08211 1270 aaKnown RBP12.77□□□□□ -0.37
SMPD1-202ENST00000526280 CALCOCO2Q13137 446 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 TCEA2Q15560 299 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 ERCC6LQ2NKX8 1250 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 DEFB133Q30KQ1 61 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 MSS51Q4VC12 460 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 DNAJC21Q5F1R6 531 aaKnown RBP12.77□□□□□ -0.37
SMPD1-202ENST00000526280 PSAPL1Q6NUJ1 521 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 CES3Q6UWW8 571 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 TAS2R42Q7RTR8 314 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 SERPINA9Q86WD7 417 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 GKN2Q86XP6 184 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 NRROSQ86YC3 692 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms