RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 RASGRP1O95267 797 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF16P17020 682 aaPredicted RBP13.6□□□□□ -0.23
LRRK1-202ENST00000525284 CCL15Q16663 113 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 ATAD3CQ5T2N8 411 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 AADACL2Q6P093 401 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 VTCN1Q7Z7D3 282 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 CRYBG2Q8N1P7 616 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 GALNT11Q8NCW6 608 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 CHST13Q8NET6 341 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 SEC14L1Q92503 715 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 MROH8Q9H579 483 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 TM9SF3Q9HD45 589 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 TUBG2Q9NRH3 451 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 ABCD2Q9UBJ2 740 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 CEP152O94986 1710 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 A0A1B0GVC2 190 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 RPLP0P05388 317 aaKnown RBP13.6□□□□□ -0.23
LRRK1-202ENST00000525284 FCER2P06734 321 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF823P16415 610 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 SSR2P43308 183 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 RRP1BQ14684 758 aaKnown RBP13.6□□□□□ -0.23
LRRK1-202ENST00000525284 TMEM17Q86X19 198 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 ZMIZ2Q8NF64 920 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF606Q8WXB4 792 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 LENG9Q96B70 501 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 LIN37Q96GY3 246 aaPredicted RBP13.6□□□□□ -0.23
LRRK1-202ENST00000525284 PPM1MQ96MI6 270 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 CDH19Q9H159 772 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 DNMT3LQ9UJW3 386 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 FBXL3Q9UKT7 428 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 USP6P35125 1406 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 EFCAB6Q5THR3 1501 aa13.6□□□□□ -0.23
LRRK1-202ENST00000525284 MDFIC2A0A1B0GVS7 189 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 DCDC2CA8MYV0 355 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 IL1R1P14778 569 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 HSD17B2P37059 387 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 RORCP51449 518 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF135P52742 658 aaPredicted RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF268Q14587 947 aaPredicted RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 LARS2Q15031 903 aaKnown RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 NODALQ96S42 347 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 SGK2Q9HBY8 427 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 GNG13Q9P2W3 67 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 HYKKA2RU49 373 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 PRR5-ARHGAP8B1AHC4 643 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 SLC2A2P11168 524 aaPredicted RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 TTPAP49638 278 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 SOX10P56693 466 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ARHGAP8P85298 464 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 RBM20Q5T481 1227 aaKnown RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 OR2AJ1Q8NGZ0 328 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 AUTS2Q8WXX7 1259 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 CIDECQ96AQ7 238 aaPredicted RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ATG4CQ96DT6 458 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 LINGO1Q96FE5 620 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 TSSK3Q96PN8 268 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 MRPL45Q9BRJ2 306 aaKnown RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 SLC39A8Q9C0K1 460 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ANKRA2Q9H9E1 313 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ERVK-5Q9HDB9 667 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 NYAP2Q9P242 653 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ITGA11Q9UKX5 1188 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 LAMC1P11047 1609 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 SRRM3A6NNA2 597 aaPredicted RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 FPGTO14772 594 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF12P17014 697 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 OGNP20774 298 aaKnown RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 RYKP34925 604 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 TLE2Q04725 743 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 FDXACB1Q9BRP7 624 aaPredicted RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 MKLN1Q9UL63 735 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 DPPA5A6NC42 116 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 DDX3XO00571 662 aaKnown RBP eCLIP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 COL6A1P12109 1028 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 SLC39A12Q504Y0 691 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ALG10BQ5I7T1 473 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 COLEC12Q5KU26 742 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 FAM43BQ6ZT52 329 aaPredicted RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 SLC16A9Q7RTY1 509 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 NSUN4Q96CB9 384 aaKnown RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 OSMRQ99650 979 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 RTKNQ9BST9 563 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 CXorf21Q9HAI6 301 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ENY2Q9NPA8 101 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 GSKIPQ9P0R6 139 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ASF1AQ9Y294 204 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 HECW2Q9P2P5 1572 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 PIRTP0C851 137 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 VAMP1P23763 118 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 S100PP25815 95 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 METTL21CQ5VZV1 264 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 USP43Q70EL4 1123 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 PHTF2Q8N3S3 785 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 OXR1Q8N573 874 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 TMIEQ8NEW7 156 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF431Q8TF32 576 aaPredicted RBP13.59□□□□□ -0.23
LRRK1-202ENST00000525284 TAPBPLQ9BX59 468 aa13.59□□□□□ -0.23
LRRK1-202ENST00000525284 AHCYP23526 432 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 CDH13P55290 713 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms