RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 COPS8Q99627 209 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TIMM29Q9BSF4 260 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 BOCQ9BWV1 1114 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TSSK1BQ9BXA7 367 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 CLPBQ9H078 707 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 DDX47Q9H0S4 455 aaKnown RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 CASS4Q9NQ75 786 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PIH1D1Q9NWS0 290 aaKnown RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TAAR2Q9P1P5 351 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ATXN10Q9UBB4 475 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 FKBPLQ9UIM3 349 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 RIMKLBQ9ULI2 386 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 CNOT6Q9ULM6 557 aaKnown RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PADI4Q9UM07 663 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TCAF1Q9Y4C2 921 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 OAS3Q9Y6K5 1087 aaKnown RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRPM6Q9BX84 2022 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 ANKRD36A6QL64 1941 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 KIR2DS5A0A0G2JLQ3 304 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 A0A0G2JNG1 304 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MED19A0JLT2 244 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MAGEB16A2A368 324 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCDC78A2IDD5 438 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MROH6A6NGR9 719 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR5K4A6NMS3 321 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 H7C0S8 307 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 KIR2DS3K7RE56 304 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 SMAPO00193 183 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 CHUKO15111 745 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 HYAL3O43820 417 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT1A9O60656 530 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 DNAJC6O75061 913 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MTX2O75431 263 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 FTH1P02794 183 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 CELA2BP08218 269 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 GSTM1P09488 218 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MLNP12872 115 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 JUPP14923 745 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 GLB1P16278 677 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF7P17097 686 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT1A6P19224 532 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 IDSP22304 550 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT1A1P22309 533 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT1A4P22310 534 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 AK4P27144 223 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 PMLP29590 882 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 PBLDP30039 288 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT1A3P35503 534 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT1A5P35504 534 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MAGEA6P43360 314 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 GSTM4Q03013 218 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMEM115Q12893 351 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 PTK6Q13882 451 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 SPIDRQ14159 915 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 ITIH4Q14624 930 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 KCNJ11Q14654 390 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 PTPRCAPQ14761 206 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 KIR2DS5Q14953 304 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 PLA2G4EQ3MJ16 856 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 FASTKD1Q53R41 847 aaKnown RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 FNBP1LQ5T0N5 605 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 CERCAMQ5T4B2 595 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF648Q5T619 568 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 TSTD2Q5T7W7 516 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 HES3Q5TGS1 186 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MRNIPQ6NTE8 343 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 GUSBP11Q6P575 273 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 LRRC8BQ6P9F7 803 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 DHRS13Q6UX07 377 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 CERS6Q6ZMG9 384 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 DET1Q7L5Y6 550 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MAATS1Q7Z4T9 603 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 RAB44Q7Z6P3 723 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 SDCCAG8Q86SQ7 713 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLC9B2Q86UD5 537 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 AMZ2Q86W34 360 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMPRSS12Q86WS5 348 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 CREG2Q8IUH2 290 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLC35F3Q8IY50 421 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 NXPE1Q8N323 547 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 C17orf53Q8N3J3 647 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 BEND7Q8N7W2 519 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 PNPLA1Q8N8W4 532 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 BBOF1Q8ND07 529 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MCUQ8NE86 351 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MNS1Q8NEH6 495 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLCO2A1Q92959 643 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCDC74AQ96AQ1 378 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 SH3KBP1Q96B97 665 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 CDKN2AIPNLQ96HQ2 116 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 DEPDC7Q96QD5 511 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT1A7Q9HAW7 530 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT1A10Q9HAW8 530 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 UGT1A8Q9HAW9 530 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MRM3Q9HC36 420 aaKnown RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 ARFGAP3Q9NP61 516 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 KLC4Q9NSK0 619 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 CATSPERZQ9NTU4 200 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZDHHC3Q9NYG2 299 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 PCYOX1Q9UHG3 505 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms