RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 MILR1Q7Z6M3 343 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 SPARTQ8N0X7 666 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 OR10A6Q8NH74 314 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 ISL2Q96A47 359 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 C3orf30Q96M34 536 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 SLC30A3Q99726 388 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 NACA2Q9H009 215 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 RNF38Q9H0F5 515 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 NDFIP2Q9NV92 336 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 DNAJB9Q9UBS3 223 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 ZMYM5Q9UJ78 669 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 EFCAB9A8MZ26 197 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 EVPLLA8MZ36 301 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 DCLK1O15075 740 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 SH3BP5O60239 455 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 PGLSO95336 258 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 CD68P34810 354 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-212ENST00000523387 SHMT2P34897 504 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 SCNN1AP37088 669 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 OR4D2P58180 307 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 MCCD1P59942 119 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-212ENST00000523387 RUNX1T1Q06455 604 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 FOXM1Q08050 763 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 DEPDC1Q5TB30 811 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 CACHD1Q5VU97 1274 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 STX19Q8N4C7 294 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 AADATQ8N5Z0 425 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 NPWQ8N729 165 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 PTCD2Q8WV60 388 aaKnown RBP8.97□□□□□ -0.97
CSMD1-212ENST00000523387 DMRTB1Q96MA1 342 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 APOL5Q9BWW9 433 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 C1QTNF1Q9BXJ1 281 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 NXF3Q9H4D5 531 aaKnown RBP8.97□□□□□ -0.97
CSMD1-212ENST00000523387 RMND5AQ9H871 391 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 NANOGQ9H9S0 305 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 IMPAD1Q9NX62 359 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 TEKT2Q9UIF3 430 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 WBP11Q9Y2W2 641 aaKnown RBP8.97□□□□□ -0.97
CSMD1-212ENST00000523387 DNAJC15Q9Y5T4 150 aa8.97□□□□□ -0.97
CSMD1-212ENST00000523387 SULT1C4O75897 302 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 GABBR2O75899 941 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 CD36P16671 472 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 GPX3P22352 226 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 RCVRNP35243 200 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 ZRANB3Q5FWF4 1079 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 ATAD3BQ5T9A4 648 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 UGT3A1Q6NUS8 523 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 DSG4Q86SJ6 1040 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 HID1Q8IV36 788 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 SPNS2Q8IVW8 549 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 PELI3Q8N2H9 469 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 GOLM1Q8NBJ4 401 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 C2CD4AQ8NCU7 369 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-212ENST00000523387 PPP1R13LQ8WUF5 828 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 TBATAQ96M53 351 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 NSUN5Q96P11 429 aaKnown RBP8.96□□□□□ -0.97
CSMD1-212ENST00000523387 KLHL5Q96PQ7 755 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 GAD1Q99259 594 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 NPY6RQ99463 290 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 MROQ9BYG7 248 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 QTRT2Q9H974 415 aaKnown RBP8.96□□□□□ -0.97
CSMD1-212ENST00000523387 INTS7Q9NVH2 962 aaKnown RBP8.96□□□□□ -0.97
CSMD1-212ENST00000523387 WDR70Q9NW82 654 aa8.96□□□□□ -0.97
CSMD1-212ENST00000523387 POLR3HQ9Y535 204 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-212ENST00000523387 TFECO14948 347 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 AIREO43918 545 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 CDK14O94921 469 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 PAX3P23760 479 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 GABRB3P28472 473 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 MAP2K4P45985 399 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 ZNF135P52742 658 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 AIF1P55008 147 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 CYP4F2P78329 520 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 CYP4F3Q08477 520 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 CRY1Q16526 586 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 UNC50Q53HI1 259 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 ARMCX4Q5H9R4 360 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 TSTD2Q5T7W7 516 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 SULT1C3Q6IMI6 304 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 CTU1Q7Z7A3 348 aaKnown RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 ITIH5Q86UX2 942 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 CNIH3Q8TBE1 160 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 CENPIQ92674 756 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 KHSRPQ92945 711 aaKnown RBP eCLIP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 TRIM63Q969Q1 353 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 DACT3Q96B18 629 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 EFHD2Q96C19 240 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 AURKBQ96GD4 344 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 MAELQ96JY0 434 aaKnown RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 SPATA17Q96L03 361 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 UHRF1Q96T88 793 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 TRIM62Q9BVG3 475 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 GPN2Q9H9Y4 310 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 SIAEQ9HAT2 523 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 MAGEE1Q9HCI5 957 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 ZFP14Q9HCL3 533 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.96□□□□□ -0.98
CSMD1-212ENST00000523387 FBXW11Q9UKB1 542 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 LOC100130705A0A1B0GUX0 176 aa8.96□□□□□ -0.98
CSMD1-212ENST00000523387 H3BRB1 525 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms