RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 A6NCN8 305 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 RCCD1A6NED2 376 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 DUX1O43812 170 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 CSTF2P33240 577 aaKnown RBP eCLIP20.44■□□□□ 0.86
SDCBP-209ENST00000522243 ZNF75DP51815 510 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 TRA2AQ13595 282 aaKnown RBP eCLIP20.44■□□□□ 0.86
SDCBP-209ENST00000522243 LY6DQ14210 128 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 INSCQ1MX18 579 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 KHDC1Q4VXA5 237 aaKnown RBP20.44■□□□□ 0.86
SDCBP-209ENST00000522243 SIRPB2Q5JXA9 342 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 C11orf63Q6NUN7 778 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 SLC9B2Q86UD5 537 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 PHYKPLQ8IUZ5 450 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 IPMKQ8NFU5 416 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 HTR3CQ8WXA8 447 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 OXNAD1Q96HP4 312 aaPredicted RBP20.44■□□□□ 0.86
SDCBP-209ENST00000522243 RBM41Q96IZ5 413 aaKnown RBP20.44■□□□□ 0.86
SDCBP-209ENST00000522243 MRGPRX2Q96LB1 330 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 RBSNQ9H1K0 784 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 STN1Q9H668 368 aaKnown RBP20.44■□□□□ 0.86
SDCBP-209ENST00000522243 OCIAD1Q9NX40 245 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 SLC23A2Q9UGH3 650 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 TMPRSS11EQ9UL52 423 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 DNAJC16Q9Y2G8 782 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.44■□□□□ 0.86
SDCBP-209ENST00000522243 BPTFQ12830 3046 aa20.44■□□□□ 0.86
SDCBP-209ENST00000522243 LOC285095A0A1B0GVY8 99 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 MTSS1O43312 755 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 ARSDP51689 593 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 MANEAQ5SRI9 462 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 PDPK2PQ6A1A2 396 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 ZNF843Q8N446 348 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 AGBL5Q8NDL9 886 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 NCSTNQ92542 709 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 ART4Q93070 314 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 QKIQ96PU8 341 aaKnown RBP eCLIP20.43■□□□□ 0.86
SDCBP-209ENST00000522243 PLEKHG4BQ96PX9 1271 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 FCRL5Q96RD9 977 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 TAAR9Q96RI9 348 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 SRPK1Q96SB4 655 aaKnown RBP20.43■□□□□ 0.86
SDCBP-209ENST00000522243 DPYSL5Q9BPU6 564 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 TBC1D10AQ9BXI6 508 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 SEMA4CQ9C0C4 833 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 LUC7LQ9NQ29 371 aaKnown RBP20.43■□□□□ 0.86
SDCBP-209ENST00000522243 SCHIP1Q9P0W5 487 aaPredicted RBP20.43■□□□□ 0.86
SDCBP-209ENST00000522243 PCDHB11Q9Y5F2 797 aa20.43■□□□□ 0.86
SDCBP-209ENST00000522243 EPN1Q9Y6I3 576 aaPredicted RBP20.43■□□□□ 0.86
SDCBP-209ENST00000522243 ATRXP46100 2492 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 EFCAB7A8K855 629 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 H7C0C1 242 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 CHUKO15111 745 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 BUD23O43709 281 aaKnown RBP20.42■□□□□ 0.86
SDCBP-209ENST00000522243 CDK14O94921 469 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 NDUFA10O95299 355 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 SLC2A4P14672 509 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 RBL1P28749 1068 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 TNNT3P45378 269 aaPredicted RBP20.42■□□□□ 0.86
SDCBP-209ENST00000522243 ATP5OP48047 213 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 NAP1L1P55209 391 aaKnown RBP20.42■□□□□ 0.86
SDCBP-209ENST00000522243 SEPT7Q16181 437 aaKnown RBP20.42■□□□□ 0.86
SDCBP-209ENST00000522243 PPP2R5EQ16537 467 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 ATP13A5Q4VNC0 1218 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 CCDC181Q5TID7 509 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 BBS12Q6ZW61 710 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 LRRTM4Q86VH4 590 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 FAM129CQ86XR2 697 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 TTC30BQ8N4P2 665 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 GDAP1Q8TB36 358 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 BLOC1S5Q8TDH9 187 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 SH3KBP1Q96B97 665 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 VAT1Q99536 393 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 CPNE7Q9UBL6 633 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 KLHL3Q9UH77 587 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 RSPH14Q9UHP6 348 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 B3GALT1Q9Y5Z6 326 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 DUSP10Q9Y6W6 482 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 SDK2Q58EX2 2172 aa20.42■□□□□ 0.86
SDCBP-209ENST00000522243 KIR2DS5A0A0G2JLQ3 304 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 A0A0G2JNG1 304 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 OR5K4A6NMS3 321 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 HACD1B0YJ81 288 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 KIR2DS3K7RE56 304 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 KMOO15229 486 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 ZNF7P17097 686 aaPredicted RBP20.41■□□□□ 0.86
SDCBP-209ENST00000522243 CD82P27701 267 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 HMGCLP35914 325 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 CLCNKAP51800 687 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 KIR2DS5Q14953 304 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 SLC1A5Q15758 541 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 DTX1Q86Y01 620 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 ZNF547Q8IVP9 402 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 PANX2Q96RD6 677 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 SLC39A1Q9NY26 324 aa20.41■□□□□ 0.86
SDCBP-209ENST00000522243 MACROD2A1Z1Q3 448 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 PDZK1P1A8MUH7 402 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 GPR89AB7ZAQ6 455 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 APOC4-APOC2K7ER74 178 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 GPR39O43194 453 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 VEGFDO43915 354 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 EPOP01588 193 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms