RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 AMBRA1Q9C0C7 1298 aa4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 KCNK9Q9NPC2 374 aa4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 FAM114A2Q9NRY5 505 aa4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 SETD4Q9NVD3 440 aa4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 PSD3Q9NYI0 1048 aa4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 NKX1-2Q9UD57 310 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 PCYOX1Q9UHG3 505 aa4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 ADAM21Q9UKJ8 722 aa4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 R3HDM2Q9Y2K5 976 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 NFS1Q9Y697 457 aa4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 RALGAPA2Q2PPJ7 1873 aa4.92□□□□□ -1.62
CTNNA1-212ENST00000518919 MBLAC1A4D2B0 266 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TMEM191CA6NGB0 347 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 AGAP5A6NIR3 686 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 MARCH11A6NNE9 402 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 ZAR1LA6NP61 321 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 AHRRA9YTQ3 701 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 GOLGA8KD6RF30 607 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 HAS3O00219 553 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 RNASET2O00584 256 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 PPEF2O14830 753 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TP73O15350 636 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 GPR42O15529 346 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 HNRNPRO43390 633 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 SHOX2O60902 331 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 PPFIA2O75334 1257 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 NCR1O76036 304 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TMEM63AO94886 807 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 PLATP00750 562 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 ERBB2P04626 1255 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 ITGB3P05106 788 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 CALB1P05937 261 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 GATA3P23771 443 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TMOD1P28289 359 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 CTGFP29279 349 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 HOXA11P31270 313 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 HOXC8P31273 242 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 CHRNA3P32297 505 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 GGT5P36269 586 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 GJC1P36383 396 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 RPL21P46778 160 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 POLD2P49005 469 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 LMAN1P49257 510 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 CLCN2P51788 898 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 DRG2P55039 364 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 CDH8P55286 799 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 GSCP56915 257 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 HUNKP57058 714 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 YWHAEP62258 255 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 RPL7AP62424 266 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 INCA1Q0VD86 236 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 SEMA3BQ13214 749 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 ERV3-1Q14264 604 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TMEM132DQ14C87 1099 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 BAK1Q16611 211 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 DCAF4L1Q3SXM0 396 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 AASDHQ4L235 1098 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 ZNF667Q5HYK9 610 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 PRAMEF19Q5SWL8 479 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 CFAP58Q5T655 872 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TEDDM1Q5T9Z0 273 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 CYP4A22Q5TCH4 519 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 LIPMQ5VYY2 423 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 SP5Q6BEB4 398 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TXNRD3NBQ6F5E7 133 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 PPP1R2P3Q6NXS1 205 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 DNAJC24Q6P3W2 148 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 LRIG3Q6UXM1 1119 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 B4GALNT4Q76KP1 1039 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 ZNF771Q7L3S4 317 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 R3HCC1LQ7Z5L2 792 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TLK2Q86UE8 772 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 KATNAL2Q8IYT4 538 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 NIPA2Q8N8Q9 360 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 SLC4A11Q8NBS3 891 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TMEM35BQ8NCS4 154 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 JOSD2Q8TAC2 188 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 FEZF2Q8TBJ5 459 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 UBE2Q2Q8WVN8 375 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 C1orf54Q8WWF1 131 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 SOCS4Q8WXH5 440 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 SLCO2A1Q92959 643 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 MAGOHBQ96A72 148 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 NACC2Q96BF6 587 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 R3HDM4Q96D70 268 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 BOD1Q96IK1 185 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 VPS50Q96JG6 964 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 VCPIP1Q96JH7 1222 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 ZMAT2Q96NC0 199 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 MCEEQ96PE7 176 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 ERP44Q9BS26 406 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 DPCDQ9BVM2 203 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 FAM49AQ9H0Q0 323 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 RAB17Q9H0T7 212 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 ASB7Q9H672 318 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 LRRC19Q9H756 370 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 NRDE2Q9H7Z3 1164 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 CYP3A43Q9HB55 503 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 NSMCE4AQ9NXX6 385 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 TUBGCP4Q9UGJ1 667 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms