RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 ASB1Q9Y576 335 aa16.44■□□□□ 0.22
PCDHGA11-202ENST00000518882 NPEPPSL1A6NEC2 478 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 VPS4BO75351 444 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 SLC22A3O75751 556 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 LDLRP01130 860 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 FGF1P05230 155 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 HNRNPCP07910 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 HOXB8P17481 243 aaPredicted RBP16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 OGNP20774 298 aaKnown RBP16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 POLR2JP52435 117 aaKnown RBP16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 YWHAHQ04917 246 aaPredicted RBP16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 IL10RBQ08334 325 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 TUSC3Q13454 348 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 SERINC3Q13530 473 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 ZNF554Q86TJ5 538 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 MON1AQ86VX9 555 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 TBC1D15Q8TC07 691 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 GPR152Q8TDT2 470 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 TANKQ92844 425 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 CDKN2AIPNLQ96HQ2 116 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 BRINP2Q9C0B6 783 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 POLR1EQ9GZS1 481 aaKnown RBP16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 MUC13Q9H3R2 512 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 FAIMQ9NVQ4 179 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 GMIPQ9P107 970 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 SCML2Q9UQR0 700 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 SCN10AQ9Y5Y9 1956 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 RAMP2O60895 175 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 HLA-DPA1P20036 260 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 ELK4P28324 431 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 GRK4P32298 578 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 XKR5Q6UX68 686 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 KLHDC9Q8NEP7 349 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 NUDT8Q8WV74 236 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 THAP11Q96EK4 314 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 NSMCE3Q96MG7 304 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 RNF145Q96MT1 663 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 CHID1Q9BWS9 393 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 NTN4Q9HB63 628 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 C8orf4Q9NR00 106 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 PCTPQ9UKL6 214 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 PADI3Q9ULW8 664 aa16.43■□□□□ 0.22
PCDHGA11-202ENST00000518882 CHD5Q8TDI0 1954 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 LCHNA4D1U4 455 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 B4GALT3O60512 393 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 HMBSP08397 361 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 PBX3P40426 434 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 CDKN1CP49918 316 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 MAPK10P53779 464 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 EEFSECP57772 596 aaKnown RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 ZIK1Q3SY52 487 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 OTUD3Q5T2D3 398 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 TMEM214Q6NUQ4 689 aaKnown RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 SLC2A7Q6PXP3 512 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 RALGPS2Q86X27 583 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 MIB1Q86YT6 1006 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 PROKR1Q8TCW9 393 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 PEX13Q92968 403 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 ISG20Q96AZ6 181 aaKnown RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 FAM210AQ96ND0 272 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 SMIM14Q96QK8 99 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 GPR21Q99679 349 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 IFT80Q9P2H3 777 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 LEF1Q9UJU2 399 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 SPO11Q9Y5K1 396 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 TRIM64BA6NI03 449 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 BTN3A1O00481 513 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 SNX2O60749 519 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 ESRRBO95718 433 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 UMPSP11172 480 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 MATN1P21941 496 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 HMOX2P30519 316 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 MRPL19P49406 292 aaKnown RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 MGAT3Q09327 533 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 BNIP3Q12983 259 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 FAM117BQ6P1L5 589 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 CXCL17Q6UXB2 119 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 ITIH5Q86UX2 942 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 ZBTB46Q86UZ6 589 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 COLGALT2Q8IYK4 626 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 BPIFB1Q8TDL5 484 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 MUS81Q96NY9 551 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 RPRD1AQ96P16 312 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 PAIP1Q9H074 479 aaKnown RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 SYTL2Q9HCH5 934 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 TAS2R13Q9NYV9 303 aa16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 MAGED1Q9Y5V3 778 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA11-202ENST00000518882 UPK1AO00322 258 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 GPR182O15218 404 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 ZSCAN9O15535 394 aaPredicted RBP16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 ZNF623O75123 536 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 INHBBP09529 407 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 UROSP10746 265 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 TCF3P15923 654 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 HTR1EP28566 365 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 OR1E1P30953 314 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 TTKP33981 857 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 SHMT2P34897 504 aa16.41■□□□□ 0.22
PCDHGA11-202ENST00000518882 HLCSP50747 726 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms