RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ACSL3O95573 720 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 GH1P01241 217 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 IFNA7P01567 189 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 MYL3P08590 195 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RBP1P09455 135 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRIM49P0CI25 452 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRIM49CP0CI26 452 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 DUX4L2P0CJ85 424 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 DUX4L3P0CJ86 424 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 DUX4L4P0CJ87 422 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 DUX4L5P0CJ88 424 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 DUX4L6P0CJ89 424 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 DUX4L7P0CJ90 424 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SAGP10523 405 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 HSPD1P10809 573 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 MBL2P11226 248 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PRG2P13727 222 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 POU2F1P14859 743 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CSF2RAP15509 400 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF182P17025 639 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 GJA1P17302 382 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TCN1P20061 433 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 FGFR4P22455 802 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PROZP22891 400 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 EEF1B2P24534 225 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 DNAJA1P31689 397 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 BMP8BP34820 402 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SOX6P35712 828 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CPOXP36551 454 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 COILP38432 576 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 IL6STP40189 918 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 OPRL1P41146 370 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ETV5P41161 510 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ALDH7A1P49419 539 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 HLCSP50747 726 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SCNN1GP51170 649 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ARHGDIAP52565 204 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 GBX2P52951 348 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 MYL6P60660 151 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ACTR2P61160 394 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 MRPS22P82650 360 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PPARDQ03181 441 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CD300CQ08708 224 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 STX5Q13190 355 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TNK1Q13470 666 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF169Q14929 603 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 NFIXQ14938 502 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 KIR3DS1Q14943 382 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAB39AQ14964 217 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 EMC2Q15006 297 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PRKD1Q15139 912 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TMED2Q15363 201 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 LTB4RQ15722 352 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 HIST2H2ACQ16777 129 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 KNOP1Q1ED39 458 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TOR2AQ5JU69 321 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 KRBOX4Q5JUW0 171 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 EPHA10Q5JZY3 1008 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RBM48Q5RL73 367 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ATAD3CQ5T2N8 411 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 IFIT1BQ5T764 474 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ATF7IP2Q5U623 682 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 LRRC66Q68CR7 880 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 HEATR6Q6AI08 1181 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 KIAA1211LQ6NV74 962 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PNCKQ6P2M8 343 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 BRAT1Q6PJG6 821 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 VHLLQ6RSH7 139 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZYG11AQ6WRX3 759 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CATSPERGQ6ZRH7 1159 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 FRMD7Q6ZUT3 714 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RFX8Q6ZV50 586 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 C16orf86Q6ZW13 317 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CEP68Q76N32 757 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PRSS48Q7RTY5 328 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 C16orf62Q7Z3J2 963 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RNF180Q86T96 592 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 LINC00523Q86TU6 105 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC9B2Q86UD5 537 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ERO1BQ86YB8 467 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAB43Q86YS6 212 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 UBQLNLQ8IYU4 475 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TCTE3Q8IZS6 198 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 FIBCD1Q8N539 461 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ARFGAP1Q8N6T3 406 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ANKFN1Q8N957 763 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 C19orf47Q8N9M1 422 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TMIEQ8NEW7 156 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR10T2Q8NGX3 314 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 METTL6Q8TCB7 284 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 IPCEF1Q8WWN9 437 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ELMO1Q92556 727 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC25A36Q96CQ1 311 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 C10orf90Q96M02 699 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZDHHC15Q96MV8 337 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF285Q96NJ3 590 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PIP5K1AQ99755 562 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 FAM118BQ9BPY3 351 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CLSTN3Q9BQT9 956 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF251Q9BRH9 671 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms