RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 FAM159BA6NKW6 160 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 TOR1BO14657 336 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 OR1I1O60431 355 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 ZNF8P17098 575 aaPredicted RBP9.78□□□□□ -0.84
CLN8-202ENST00000517514 ITGALP20701 1170 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 HOXD12P35452 270 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 RABIFP47224 123 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 AFF3P51826 1226 aaKnown RBP9.78□□□□□ -0.84
CLN8-202ENST00000517514 PRAMEP78395 509 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 MPP1Q00013 466 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 NHLH1Q02575 133 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 CTBP1Q13363 440 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 ITGA9Q13797 1035 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 EFTUD2Q15029 972 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLN8-202ENST00000517514 DUOXA1Q1HG43 343 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 ALG11Q2TAA5 492 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 KIF19Q2TAC6 998 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 HSP90AA5PQ58FG0 334 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 PRAMEF14Q5SWL7 426 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 TCEAL6Q6IPX3 200 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 ZNF549Q6P9A3 640 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 SLC23A3Q6PIS1 610 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 MACC1Q6ZN28 852 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 C3orf62Q6ZUJ4 267 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 CYS1Q717R9 158 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 C11orf96Q7Z7L8 435 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 KCNMB4Q86W47 210 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 CILP2Q8IUL8 1156 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 RASGEF1AQ8N9B8 481 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 FBF1Q8TES7 1133 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 TCEAL3Q969E4 200 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 PDXPQ96GD0 296 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 TRIM39Q9HCM9 518 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 PARD6AQ9NPB6 346 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 PHPT1Q9NRX4 125 aaPredicted RBP9.78□□□□□ -0.84
CLN8-202ENST00000517514 IARS2Q9NSE4 1012 aaKnown RBP9.78□□□□□ -0.84
CLN8-202ENST00000517514 ZDHHC3Q9NYG2 299 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 RABGEF1Q9UJ41 708 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 ANKRD6Q9Y2G4 727 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 PLEKHM1Q9Y4G2 1056 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 PCDHGA5Q9Y5G8 931 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 SNX11Q9Y5W9 270 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 SLC30A1Q9Y6M5 507 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 PRR19A6NJB7 356 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 CHUKO15111 745 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 RIPK2O43353 540 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 SLC25A14O95258 325 aaPredicted RBP9.77□□□□□ -0.85
CLN8-202ENST00000517514 PYGLP06737 847 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 RETP07949 1114 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 GSTA2P09210 222 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 OGNP20774 298 aaKnown RBP9.77□□□□□ -0.85
CLN8-202ENST00000517514 SLC1A2P43004 574 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 ABCG1P45844 678 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 PMS2P54278 862 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 IRX4P78413 519 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 TIAL1Q01085 375 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLN8-202ENST00000517514 OVGP1Q12889 678 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 TMEM115Q12893 351 aaPredicted RBP9.77□□□□□ -0.85
CLN8-202ENST00000517514 GRIK2Q13002 908 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 ZNF658BQ4V348 819 aaPredicted RBP9.77□□□□□ -0.85
CLN8-202ENST00000517514 FASTKD1Q53R41 847 aaKnown RBP9.77□□□□□ -0.85
CLN8-202ENST00000517514 ZNF542PQ5EBM4 170 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 CTSL3PQ5NE16 218 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 LDLRAP1Q5SW96 308 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 CNSTQ6PJW8 725 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 DOK6Q6PKX4 331 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 PACS1Q6VY07 963 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 TAS2R42Q7RTR8 314 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 ASCL5Q7RTU5 278 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 KANSL1Q7Z3B3 1105 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 PHYKPLQ8IUZ5 450 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 PALM2Q8IXS6 379 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 RBFAQ8N0V3 343 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 DCLK2Q8N568 766 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 CLDN19Q8N6F1 224 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 C2CD4AQ8NCU7 369 aaPredicted RBP9.77□□□□□ -0.85
CLN8-202ENST00000517514 ACVR1CQ8NER5 493 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 OR2I1PQ8NGU4 316 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 FAM174AQ8TBP5 190 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 LKAAEAR1Q8TD35 194 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLN8-202ENST00000517514 LPGAT1Q92604 370 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 TSACCQ96A04 125 aaPredicted RBP9.77□□□□□ -0.85
CLN8-202ENST00000517514 ULK4Q96C45 1275 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 WDR92Q96MX6 357 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 BIRC8Q96P09 236 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 OR2AG1Q9H205 316 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 P2RY12Q9H244 342 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 IL21RQ9HBE5 538 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 FBXO6Q9NRD1 293 aaPredicted RBP9.77□□□□□ -0.85
CLN8-202ENST00000517514 TM7SF3Q9NS93 570 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 RXFP3Q9NSD7 469 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 GULP1Q9UBP9 304 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 SLC23A2Q9UGH3 650 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 CRLS1Q9UJA2 301 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 FBXO5Q9UKT4 447 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 MED16Q9Y2X0 877 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 PRKAB1Q9Y478 270 aa9.77□□□□□ -0.85
CLN8-202ENST00000517514 ARID1BQ8NFD5 2236 aaPredicted RBP9.76□□□□□ -0.85
CLN8-202ENST00000517514 ARHGEF17Q96PE2 2063 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms