RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 KLHL28Q9NXS3 571 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 SUCOQ9UBS9 1254 aaKnown RBP10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 EVLQ9UI08 416 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 GTF2A1LQ9UNN4 478 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 TIMM22Q9Y584 194 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 CLDN11O75508 207 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 IGFBP4P22692 258 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 MAPK8P45983 427 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 POLD2P49005 469 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 TAS2R39P59534 338 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 MYBPC1Q00872 1141 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 MS4A2Q01362 244 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 ARHGAP1Q07960 439 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 INCA1Q0VD86 236 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 GK3PQ14409 553 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 FAM187BQ17R55 369 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 VPS26BQ4G0F5 336 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 SPESP1Q6UW49 350 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 CANT1Q8WVQ1 401 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 ADPRHL2Q9NX46 363 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 CDK5RAP2Q96SN8 1893 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 A0A0J9YVX5 310 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 NEDD8-MDP1E9PL57 170 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 PDLIM1O00151 329 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 FAM20BO75063 409 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 KCNH1O95259 989 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 TBX18O95935 607 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 UGT2B4P06133 528 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 TNNI3P19429 210 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 CHRNA4P43681 627 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 RHDQ02161 417 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 GHRHRQ02643 423 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 CYP2A13Q16696 494 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 PIGGQ5H8A4 983 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 HECTD2Q5U5R9 776 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 CHPFQ8IZ52 775 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 TMEM199Q8N511 208 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 NMUR1Q9HB89 426 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 UBAP1Q9NZ09 502 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 SNX6Q9UNH7 406 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 DUSP12Q9UNI6 340 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 GMEB1Q9Y692 573 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 KNL1Q8NG31 2342 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 IQCF5A8MTL0 148 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 FAM220BPB1ANY3 271 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 MT-ND1P03886 318 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 SELPP16109 830 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 MAGEA6P43360 314 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 ENTPD1P49961 510 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 APLP1P51693 650 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 TGM3Q08188 693 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 ILF2Q12905 390 aaKnown RBP10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 VARS2Q5ST30 1063 aaKnown RBP10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 BROXQ5VW32 411 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 MAVSQ7Z434 540 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZC3HC1Q86WB0 502 aaKnown RBP10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 SFRP1Q8N474 314 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 CLHC1Q8NHS4 586 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 PSMG2Q969U7 264 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 C19orf60Q96EN9 201 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 PRMT5O14744 637 aaPredicted RBP10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC9A3R1O14745 358 aaPredicted RBP10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 SEPT4O43236 478 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 EFCAB14O75071 495 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 DLGAP3O95886 979 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 TRAP1Q12931 704 aaKnown RBP10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 XKR6Q5GH73 641 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 NOL9Q5SY16 702 aaKnown RBP10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZNF618Q5T7W0 954 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 ARHGAP17Q68EM7 881 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 SH2D5Q6ZV89 423 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 CCDC103Q8IW40 242 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 LEF1Q9UJU2 399 aaPredicted RBP10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 RAI2Q9Y5P3 530 aa10.76□□□□□ -0.69
PCDHGA1-202ENST00000517417 COL11A2P13942 1736 aaPredicted RBP10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZBTB11O95625 1053 aaPredicted RBP10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 RHOQP17081 205 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 CYP3A5P20815 502 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 TACR2P21452 398 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 CDH3P22223 829 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 PAX3P23760 479 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 GRIA2P42262 883 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 ATP6V0D1P61421 351 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 CDKL1Q00532 357 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 PERM1Q5SV97 790 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 PLPP4Q5VZY2 271 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 TRNP1Q6NT89 227 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 FUT10Q6P4F1 479 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 ESAMQ96AP7 390 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 MTERF3Q96E29 417 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 HOPXQ9BPY8 73 aaPredicted RBP10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZFYVE1Q9HBF4 777 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 VPS51Q9UID3 782 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 SCN9AQ15858 1988 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 BBIP1A8MTZ0 92 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 OTCP00480 354 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 EIF2S1P05198 315 aaKnown RBP10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 TFAP2AP05549 437 aa10.75□□□□□ -0.69
PCDHGA1-202ENST00000517417 TKTP29401 623 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms