RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 HAND2P61296 217 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 GPC5P78333 572 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 PPP2R2BQ00005 443 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 FPGSQ05932 587 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TMEM62Q0P6H9 643 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 ABRQ12979 859 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZBTB17Q13105 803 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 PDZK1IP1Q13113 114 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 RESTQ13127 1097 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 GALNT3Q14435 633 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 SYCP1Q15431 976 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 STK11Q15831 433 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 UGCGQ16739 394 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CDONQ4KMG0 1287 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 KLHL26Q53HC5 615 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TDRD12Q587J7 1177 aaKnown RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 LDLRAP1Q5SW96 308 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 AADACL4Q5VUY2 407 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 WBP2NLQ6ICG8 309 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 LRRC8EQ6NSJ5 796 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 AADACL2Q6P093 401 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CLEC2AQ6UVW9 174 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 DPY19L3Q6ZPD9 716 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 DOK3Q7L591 496 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 NEK8Q86SG6 692 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 LUZP1Q86V48 1076 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CAMK1DQ8IU85 385 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF595Q8IYB9 648 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 BEND7Q8N7W2 519 aaPredicted RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TTLL6Q8N841 843 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 LEMD2Q8NC56 503 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 ACTRT2Q8TDY3 377 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TAS1R2Q8TE23 839 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 IP6K1Q92551 441 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 FIG4Q92562 907 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 AP2M1Q96CW1 435 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CCDC120Q96HB5 630 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 NECTIN4Q96NY8 510 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 NUDCD1Q96RS6 583 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 SIN3AQ96ST3 1273 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZBTB18Q99592 522 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 ASCL2Q99929 193 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 BCL7BQ9BQE9 202 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 RHOXF2Q9BQY4 288 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CPPED1Q9BRF8 314 aaPredicted RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 C11orf84Q9BUA3 381 aaPredicted RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TBC1D10AQ9BXI6 508 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CAPS2Q9BXY5 557 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC7A5P2Q9GIP4 190 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 VCX2Q9H322 139 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 EHD1Q9H4M9 534 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 FANCEQ9HB96 536 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 KLHL1Q9NR64 748 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 FAM114A2Q9NRY5 505 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TMEM248Q9NWD8 314 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 COPG2Q9UBF2 871 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 MGAT4CQ9UBM8 478 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 DNAJB4Q9UDY4 337 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADAMTS6Q9UKP5 1117 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TSPAN16Q9UKR8 245 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 MRPL11Q9Y3B7 192 aaKnown RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CHTOPQ9Y3Y2 248 aaKnown RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 PKP3Q9Y446 797 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CEPT1Q9Y6K0 416 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 UBE4BO95155 1302 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 MROH5Q6ZUA9 1318 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 UNC13AQ9UPW8 1703 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 TCRBV7S3A2A0A539 114 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 A1L4Q6 167 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 MAGEA13PA6NCF6 341 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CAPN14A8MX76 684 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 E7ENX8 843 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 H0Y8G0 127 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PPP6CO00743 305 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ATP2A1O14983 1001 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 WIPF1O43516 503 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PMPCBO75439 489 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF821O75541 412 aaPredicted RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 JRKO75564 520 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 SURF6O75683 361 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF202O95125 648 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CXCL14O95715 111 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 C1RP00736 705 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 KRT8P05787 483 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 LIPFP07098 398 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF888P0CJ79 500 aaPredicted RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 VPREB1P12018 145 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 SKILP12757 684 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CYP11B2P19099 503 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CD9P21926 228 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 GLDCP23378 1020 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 EEF1B2P24534 225 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ITGB8P26012 769 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PSMB4P28070 264 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ACADLP28330 430 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 HOXD9P28356 352 aaPredicted RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PTPN4P29074 926 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 TIA1P31483 386 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 VIPR1P32241 457 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC8A1P32418 973 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms