RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 KCNK4Q9NYG8 393 aa24.21■■□□□ 1.47
SNF8-213ENST00000514929 LOXL2Q9Y4K0 774 aa24.21■■□□□ 1.47
SNF8-213ENST00000514929 ZFC3H1O60293 1989 aaKnown RBP24.21■■□□□ 1.47
SNF8-213ENST00000514929 SCN8AQ9UQD0 1980 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 AGTP01019 485 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 HGFP14210 728 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 SLC2A4P14672 509 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 CD1CP29017 333 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 SPAM1P38567 509 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 PPM1FP49593 454 aaPredicted RBP24.2■■□□□ 1.46
SNF8-213ENST00000514929 ATP13A5Q4VNC0 1218 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 BROXQ5VW32 411 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 CRTC3Q6UUV7 619 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 CLEC14AQ86T13 490 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 GDAP1Q8TB36 358 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 TMEM159Q96B96 161 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 CCDC97Q96F63 343 aaPredicted RBP24.2■■□□□ 1.46
SNF8-213ENST00000514929 VPS35Q96QK1 796 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 SLC38A3Q99624 504 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 CMKLR1Q99788 373 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 NUDT22Q9BRQ3 303 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 ZMYND15Q9H091 742 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 SEMA6CQ9H3T2 930 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 OSGEPL1Q9H4B0 414 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 STN1Q9H668 368 aaKnown RBP24.2■■□□□ 1.46
SNF8-213ENST00000514929 IL17CQ9P0M4 197 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 PISDQ9UG56 409 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 AAR2Q9Y312 384 aaKnown RBP24.2■■□□□ 1.46
SNF8-213ENST00000514929 PKP3Q9Y446 797 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 ADGRG1Q9Y653 693 aa24.2■■□□□ 1.46
SNF8-213ENST00000514929 BUD23O43709 281 aaKnown RBP24.19■■□□□ 1.46
SNF8-213ENST00000514929 VEGFDO43915 354 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 MTX2O75431 263 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 ZNF189O75820 626 aaPredicted RBP24.19■■□□□ 1.46
SNF8-213ENST00000514929 PSMB4P28070 264 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 HHEXQ03014 270 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 INSCQ1MX18 579 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 NKAIN2Q5VXU1 208 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 IYDQ6PHW0 289 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 LRRTM4Q86VH4 590 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 JAMLQ86YT9 394 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 TTC13Q8NBP0 860 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 CCDC110Q8TBZ0 833 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 SPATA13Q96N96 652 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 GORASP1Q9BQQ3 440 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 DPH1Q9BZG8 443 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 IL26Q9NPH9 171 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 KLC4Q9NSK0 619 aa24.19■■□□□ 1.46
SNF8-213ENST00000514929 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.19■■□□□ 1.46
SNF8-213ENST00000514929 AKAP7Q9P0M2 348 aaPredicted RBP24.19■■□□□ 1.46
SNF8-213ENST00000514929 IGHV1OR21-1A0A087WYE8 117 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 CHUKO15111 745 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 KMOO15229 486 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 DDX3YO15523 660 aaKnown RBP24.18■■□□□ 1.46
SNF8-213ENST00000514929 KLK10O43240 276 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 CDK14O94921 469 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 F3P13726 295 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 GSDMDP57764 484 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 PLA2G4EQ3MJ16 856 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 ZNF761Q86XN6 746 aaPredicted RBP24.18■■□□□ 1.46
SNF8-213ENST00000514929 AHCYL2Q96HN2 611 aaKnown RBP24.18■■□□□ 1.46
SNF8-213ENST00000514929 TTC25Q96NG3 672 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 TMPRSS11EQ9UL52 423 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 CAPN6Q9Y6Q1 641 aa24.18■■□□□ 1.46
SNF8-213ENST00000514929 GLYATL1P3A0A0U1RQE8 302 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 A6NCN8 305 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 STX7O15400 261 aaKnown RBP24.17■■□□□ 1.46
SNF8-213ENST00000514929 CLCNKAP51800 687 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 GPLD1P80108 840 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 NFATC2Q13469 925 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 GTF2H3Q13889 308 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 KHDC1Q4VXA5 237 aaKnown RBP24.17■■□□□ 1.46
SNF8-213ENST00000514929 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.17■■□□□ 1.46
SNF8-213ENST00000514929 FAM151BQ6UXP7 276 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 ZNF574Q6ZN55 896 aaPredicted RBP24.17■■□□□ 1.46
SNF8-213ENST00000514929 SLC9B2Q86UD5 537 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 RNF10Q8N5U6 811 aaKnown RBP24.17■■□□□ 1.46
SNF8-213ENST00000514929 SH3KBP1Q96B97 665 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 FCRL3Q96P31 734 aaPredicted RBP24.17■■□□□ 1.46
SNF8-213ENST00000514929 PPP1R2P1Q96PQ5 205 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 APOL2Q9BQE5 337 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 PRORYQ9H606 182 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 SARS2Q9NP81 518 aaKnown RBP24.17■■□□□ 1.46
SNF8-213ENST00000514929 PCDHGA7Q9Y5G6 932 aa24.17■■□□□ 1.46
SNF8-213ENST00000514929 KIR2DS5A0A0G2JLQ3 304 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 A0A0G2JNG1 304 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 IGHV5-10-1A0A0J9YXX1 117 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 OR5K4A6NMS3 321 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 KIR2DS3K7RE56 304 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 PPFIA2O75334 1257 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 ZNF7P17097 686 aaPredicted RBP24.16■■□□□ 1.46
SNF8-213ENST00000514929 ITIH1P19827 911 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 SLC5A2P31639 672 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 TMEM115Q12893 351 aaPredicted RBP24.16■■□□□ 1.46
SNF8-213ENST00000514929 KIR2DS5Q14953 304 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 C16orf72Q14CZ0 275 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 CHRNA6Q15825 494 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 RANBP10Q6VN20 620 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 OR10G6Q8NH81 332 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 DTX3LQ8TDB6 740 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms