RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 DBN1Q16643 649 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 KBTBD12Q3ZCT8 623 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UBAP2Q5T6F2 1119 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 GPRC6AQ5T6X5 926 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 CEP68Q76N32 757 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 HEATR4Q86WZ0 1026 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 FUBP1Q96AE4 644 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 COPS8Q99627 209 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 CPNE1Q99829 537 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 DHRS4Q9BTZ2 278 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 ZCCHC2Q9C0B9 1178 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 P2RY12Q9H244 342 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 RMI1Q9H9A7 625 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UGT1A7Q9HAW7 530 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UGT1A10Q9HAW8 530 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UGT1A8Q9HAW9 530 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 TRIM39Q9HCM9 518 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 TM9SF3Q9HD45 589 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 FZD3Q9NPG1 666 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 SMYD2Q9NRG4 433 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 EIF2B4Q9UI10 523 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 CRLS1Q9UJA2 301 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 SLC17A4Q9Y2C5 497 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 COMMD10Q9Y6G5 202 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 ZFC3H1O60293 1989 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 A0A1B0GTW7 788 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 KLHL33A6NCF5 533 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 CFAP99D6REC4 459 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 CACNB4O00305 520 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 QSOX1O00391 747 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 CHUKO15111 745 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 BCAT2O15382 392 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 AP2A2O94973 939 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 GSTM1P09488 218 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 RALBP11234 206 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 ZNF7P17097 686 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 CD9P21926 228 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 CD38P28907 300 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 CA5AP35218 305 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 AFF3P51826 1226 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 GSTM4Q03013 218 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 PTK2BQ14289 1009 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 MACC1Q6ZN28 852 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 TAS2R42Q7RTR8 314 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 SYT12Q8IV01 421 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 RBFAQ8N0V3 343 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 UBLCP1Q8WVY7 318 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 SLC44A1Q8WWI5 657 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 SNX19Q92543 992 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 LPGAT1Q92604 370 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 ZNF514Q96K75 400 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 SLC6A18Q96N87 628 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 CCDC77Q9BR77 488 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 TMEM109Q9BVC6 243 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 ARFGAP3Q9NP61 516 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 PPANQ9NQ55 473 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 IARS2Q9NSE4 1012 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 IL1RAPL1Q9NZN1 696 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 SLC24A2Q9UI40 661 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 ZNF180Q9UJW8 692 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 GPR34Q9UPC5 381 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 FNDC3AQ9Y2H6 1198 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 PCDHB1Q9Y5F3 818 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 PCDHGA5Q9Y5G8 931 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 PCDH15Q96QU1 1955 aa11.85□□□□□ -0.51
PDLIM5-220ENST00000514830 UQCRHLA0A096LP55 91 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 SPTY2D1-AS1A0A0U1RR47 76 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 GOLGA8CPA6NN73 597 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 CXorf49A8MYA2 514 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 GOLGA8KD6RF30 607 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 F8W8V4 182 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 H0Y8X5 98 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 H3BMM5 538 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 GOLGA8TH3BQL2 631 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 PRMT5O14744 637 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 GPR39O43194 453 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 NDUFS3O75489 264 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 EPN2O95208 641 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 AHSGP02765 367 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 ESR1P03372 595 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 IVLP07476 585 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 UQCRHP07919 91 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 PRSS56P0CW18 603 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 ATP1B2P14415 290 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 GNSP15586 552 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 ITPKAP23677 461 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 HTR1BP28222 390 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 GABRB3P28472 473 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 PMLP29590 882 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 GP5P40197 560 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 DHPSP49366 369 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 EIF3BP55884 814 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 CLDN2P57739 230 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 B4GALNT1Q00973 533 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 TMEM115Q12893 351 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 CTBP1Q13363 440 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 BCL7AQ4VC05 210 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 GRTP1Q5TC63 336 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 CAPN12Q6ZSI9 719 aa11.84□□□□□ -0.51
PDLIM5-220ENST00000514830 Q6ZSR6 202 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms