RNA–Protein interactions for RNA: ENST00000514682.5

RPS3A-212, Transcript of ribosomal protein S3A, humanhuman

TSL 5 BASIC

Gene RPS3A, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-212ENST00000514682 UGT1A7Q9HAW7 530 aa16.27■□□□□ 0.2
RPS3A-212ENST00000514682 UGT1A10Q9HAW8 530 aa16.27■□□□□ 0.2
RPS3A-212ENST00000514682 UGT1A8Q9HAW9 530 aa16.27■□□□□ 0.2
RPS3A-212ENST00000514682 EIF2B3Q9NR50 452 aaKnown RBP16.27■□□□□ 0.2
RPS3A-212ENST00000514682 CLCA2Q9UQC9 943 aa16.27■□□□□ 0.2
RPS3A-212ENST00000514682 KCNK6Q9Y257 313 aa16.27■□□□□ 0.2
RPS3A-212ENST00000514682 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.27■□□□□ 0.23e-6■■■□□ 16.5
RPS3A-212ENST00000514682 PTPRBP23467 1997 aa16.27■□□□□ 0.19
RPS3A-212ENST00000514682 GOLGA6L10A0A0M3HER8 536 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 CHUKO15111 745 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 SRP72O76094 671 aaKnown RBP16.26■□□□□ 0.19
RPS3A-212ENST00000514682 MT-CO3P00414 261 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 GLB1P16278 677 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 ITGALP20701 1170 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 BASP1P80723 227 aaKnown RBP16.26■□□□□ 0.19
RPS3A-212ENST00000514682 TMPRSS15P98073 1019 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 NFATC2Q13469 925 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 PLA2G4EQ3MJ16 856 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 CDCP2Q5VXM1 449 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 TTC27Q6P3X3 843 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 LRRTM4Q86VH4 590 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 TRAPPC5Q8IUR0 188 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 DCBLD1Q8N8Z6 715 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 ZNF398Q8TD17 642 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 ACTRT1Q8TDG2 376 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 MAGOHBQ96A72 148 aaKnown RBP16.26■□□□□ 0.19
RPS3A-212ENST00000514682 CNTNAP3BQ96NU0 1288 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 CNTNAP3Q9BZ76 1288 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 RNF215Q9Y6U7 377 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 BPTFQ12830 3046 aa16.26■□□□□ 0.19
RPS3A-212ENST00000514682 MYLKQ15746 1914 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 MAP1BP46821 2468 aaKnown RBP16.25■□□□□ 0.19
RPS3A-212ENST00000514682 C1QTNF9BB2RNN3 333 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 CCL22O00626 93 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 KMOO15229 486 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 ZNF185O15231 689 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 PHF2O75151 1096 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 CDK14O94921 469 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 ECEL1O95672 775 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 C1QTNF9P0C862 333 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 TCP1P17987 556 aaKnown RBP16.25■□□□□ 0.19
RPS3A-212ENST00000514682 AKT1P31749 480 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 CA5AP35218 305 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 GRIA1P42261 906 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 XIAPP98170 497 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 TMEM115Q12893 351 aaPredicted RBP16.25■□□□□ 0.19
RPS3A-212ENST00000514682 TARDBPQ13148 414 aaKnown RBP eCLIP16.25■□□□□ 0.19
RPS3A-212ENST00000514682 BIRC2Q13490 618 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 CYP1B1Q16678 543 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 INSCQ1MX18 579 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 C17orf82Q86X59 251 aaPredicted RBP16.25■□□□□ 0.19
RPS3A-212ENST00000514682 NAGSQ8N159 534 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 WDR48Q8TAF3 677 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 PATE1Q8WXA2 126 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 ULK4Q96C45 1275 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 TTC25Q96NG3 672 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 DEPDC7Q96QD5 511 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 NAPGQ99747 312 aaPredicted RBP16.25■□□□□ 0.19
RPS3A-212ENST00000514682 TIMM29Q9BSF4 260 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 ASB8Q9H765 288 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 CASS4Q9NQ75 786 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 NLE1Q9NVX2 485 aaPredicted RBP16.25■□□□□ 0.19
RPS3A-212ENST00000514682 RABGEF1Q9UJ41 708 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 CRLS1Q9UJA2 301 aa16.25■□□□□ 0.19
RPS3A-212ENST00000514682 CCDC78A2IDD5 438 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 HEATR9A2RTY3 570 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 NUDT21O43809 227 aaKnown RBP16.24■□□□□ 0.19
RPS3A-212ENST00000514682 MSH3P20585 1137 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 MC4RP32245 332 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 COILP38432 576 aaPredicted RBP16.24■□□□□ 0.19
RPS3A-212ENST00000514682 VPS41P49754 854 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 TRIP13Q15645 432 aaPredicted RBP16.24■□□□□ 0.19
RPS3A-212ENST00000514682 CCDC38Q502W7 563 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 RBM44Q6ZP01 1051 aaKnown RBP16.24■□□□□ 0.19
RPS3A-212ENST00000514682 CCNJLQ8IV13 435 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 ZNF547Q8IVP9 402 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 CACTIN-AS1Q8N1I8 211 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 ARL14Q8N4G2 192 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 STYXQ8WUJ0 223 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 OSGEPL1Q9H4B0 414 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 KLC4Q9NSK0 619 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 LRIT1Q9P2V4 623 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 TBC1D29Q9UFV1 150 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 SLC30A1Q9Y6M5 507 aa16.24■□□□□ 0.19
RPS3A-212ENST00000514682 ASXL3Q9C0F0 2248 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.23■□□□□ 0.19
RPS3A-212ENST00000514682 A6NCN8 305 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 MROH6A6NGR9 719 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 RHPN2P1A8MT19 583 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 H7C0S8 307 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 SNX2O60749 519 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 CSO75390 466 aaKnown RBP16.23■□□□□ 0.19
RPS3A-212ENST00000514682 TCEA3O75764 348 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 EML2O95834 649 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 KRT14P02533 472 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 RPLP0P05388 317 aaKnown RBP16.23■□□□□ 0.19
RPS3A-212ENST00000514682 SLC2A4P14672 509 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 PNLIPP16233 465 aa16.23■□□□□ 0.19
RPS3A-212ENST00000514682 ZNF7P17097 686 aaPredicted RBP16.23■□□□□ 0.19
RPS3A-212ENST00000514682 FNTAP49354 379 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms