RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 MAGEE1Q9HCI5 957 aa13.15□□□□□ -0.3
PFDN1-206ENST00000514611 KLC4Q9NSK0 619 aa13.15□□□□□ -0.3
PFDN1-206ENST00000514611 SLC39A1Q9NY26 324 aa13.15□□□□□ -0.3
PFDN1-206ENST00000514611 DDX56Q9NY93 547 aaKnown RBP13.15□□□□□ -0.3
PFDN1-206ENST00000514611 SCHIP1Q9P0W5 487 aaPredicted RBP13.15□□□□□ -0.3
PFDN1-206ENST00000514611 PDP2Q9P2J9 529 aa13.15□□□□□ -0.3
PFDN1-206ENST00000514611 NFKBIL1Q9UBC1 381 aaPredicted RBP13.15□□□□□ -0.3
PFDN1-206ENST00000514611 CPNE7Q9UBL6 633 aa13.15□□□□□ -0.3
PFDN1-206ENST00000514611 KLHL3Q9UH77 587 aa13.15□□□□□ -0.3
PFDN1-206ENST00000514611 SPENQ96T58 3664 aaKnown RBP13.14□□□□□ -0.31
PFDN1-206ENST00000514611 A0A0A6YYK5 440 aaPredicted RBP13.14□□□□□ -0.31
PFDN1-206ENST00000514611 B4E171 279 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 J3QKU1 62 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 NDST3O95803 873 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 FAM87AP0C7U9 286 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 LIFP15018 202 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 TSPAN7P41732 249 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 SLC1A1P43005 524 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 MARCKSL1P49006 195 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 ATP1A2P50993 1020 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
PFDN1-206ENST00000514611 WASHC5Q12768 1159 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 SLC14A2Q15849 920 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 INSCQ1MX18 579 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 WDR74Q6RFH5 385 aaPredicted RBP13.14□□□□□ -0.31
PFDN1-206ENST00000514611 CNGA4Q8IV77 575 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 IL22RA1Q8N6P7 574 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 ZSCAN1Q8NBB4 408 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 HAUS1Q96CS2 278 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 TEKT5Q96M29 485 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 ARHGAP9Q9BRR9 750 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 TRIM39Q9HCM9 518 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 APMAPQ9HDC9 416 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 BPIFA1Q9NP55 256 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 SLC23A2Q9UGH3 650 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 TMPRSS11EQ9UL52 423 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 TFR2Q9UP52 801 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 DNAJC16Q9Y2G8 782 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 SDK2Q58EX2 2172 aa13.14□□□□□ -0.31
PFDN1-206ENST00000514611 ZNF462Q96JM2 2506 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 AHCTF1Q8WYP5 2266 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 KIR2DS5A0A0G2JLQ3 304 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 A0A0G2JNG1 304 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 AKR1B15C9JRZ8 316 aaPredicted RBP13.13□□□□□ -0.31
PFDN1-206ENST00000514611 KIR2DS3K7RE56 304 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 CHUKO15111 745 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 GPR39O43194 453 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 SLC28A2O43868 658 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 RAD1O60671 282 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 CST8O60676 142 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 ITGB2P05107 769 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 SLC2A4P14672 509 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 NFKB1P19838 968 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 CHRNA4P43681 627 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 EPHA4P54764 986 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 GFERP55789 205 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 RAB15P59190 212 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 NFKB2Q00653 900 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 TBX2Q13207 712 aaPredicted RBP13.13□□□□□ -0.31
PFDN1-206ENST00000514611 KIR2DS5Q14953 304 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 TAZQ16635 292 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 TBR1Q16650 682 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 DCAF12Q5T6F0 453 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 SPOCD1Q6ZMY3 1216 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 ARHGAP22Q7Z5H3 698 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 ZNF547Q8IVP9 402 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 TFB1MQ8WVM0 346 aaKnown RBP13.13□□□□□ -0.31
PFDN1-206ENST00000514611 SH3KBP1Q96B97 665 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 RTP4Q96DX8 246 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 RNF31Q96EP0 1072 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 PLEKHG4BQ96PX9 1271 aa13.13□□□□□ -0.31
PFDN1-206ENST00000514611 LILRA5A6NI73 299 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 PDZK1P1A8MUH7 402 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 GPR89AB7ZAQ6 455 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 PSTPIP1O43586 416 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 GPR89BP0CG08 455 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 ITGB6P18564 788 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 NR2C2P49116 596 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 CLCNKAP51800 687 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 CLCA4Q14CN2 919 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 TCEAL1Q15170 157 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 ATP13A5Q4VNC0 1218 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 KDELC1Q6UW63 502 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 LRRTM4Q86VH4 590 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 ZC3H18Q86VM9 953 aaKnown RBP13.12□□□□□ -0.31
PFDN1-206ENST00000514611 CACNA2D3Q8IZS8 1091 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 SLC25A41Q8N5S1 370 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 OXNAD1Q96HP4 312 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-206ENST00000514611 SLC12A9Q9BXP2 914 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-206ENST00000514611 ASPSCR1Q9BZE9 553 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 RAD18Q9NS91 495 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 KLHL8Q9P2G9 620 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-206ENST00000514611 ZNF624Q9P2J8 865 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-206ENST00000514611 FAM153AQ9UHL3 310 aa13.12□□□□□ -0.31
PFDN1-206ENST00000514611 INTUQ9ULD6 942 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms