RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MYL6P60660 151 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 PSME3P61289 254 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 MON1BQ7L1V2 547 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 OFCC1Q8IZS5 231 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 ZNF709Q8N972 641 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 VANGL1Q8TAA9 524 aaPredicted RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 NSUN4Q96CB9 384 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 SLC25A23Q9BV35 468 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 DZANK1Q9NVP4 752 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 TBC1D24Q9ULP9 559 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 TPRKBQ9Y3C4 175 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 WASF2Q9Y6W5 498 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 GLTPD2A6NH11 291 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 PCDHGA12O60330 932 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 MED26O95402 600 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CRYBB1P53674 252 aaPredicted RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 HKDC1Q2TB90 917 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 ZNF776Q68DI1 518 aaPredicted RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 GRHL2Q6ISB3 625 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 SLC9A9Q8IVB4 645 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 OR8K5Q8NH50 307 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CLP1Q92989 425 aaKnown RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 C16orf58Q96GQ5 468 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 SEC16BQ96JE7 1060 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 NKX2-4Q9H2Z4 354 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CENPMQ9NSP4 180 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 GPR34Q9UPC5 381 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 GNEQ9Y223 722 aaKnown RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 MEMO1Q9Y316 297 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 MTF2Q9Y483 593 aaPredicted RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 HAX1O00165 279 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 SCDO00767 359 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 P04436 131 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 GRM2Q14416 872 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 SEC23AQ15436 765 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 MED22Q15528 200 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CATSPEREQ5SY80 951 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 FAM180BQ6P0A1 224 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 PTCHD4Q6ZW05 846 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CYB5R4Q7L1T6 521 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 TRPM4Q8TD43 1214 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 TP53INP1Q96A56 240 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 PNPLA8Q9NP80 782 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 KCND1Q9NSA2 647 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CD84Q9UIB8 345 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 ZNF222Q9UK12 451 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 FZD1Q9UP38 647 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 WIF1Q9Y5W5 379 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 ABCC2Q92887 1545 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 SYN3O14994 580 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CYP11B1P15538 503 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 EPHA3P29320 983 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 GCH1P30793 250 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 SLC12A3P55017 1021 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 MPP2Q14168 576 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 DPCR1Q3MIW9 517 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 TBCELQ5QJ74 424 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 PDPK2PQ6A1A2 396 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 BNC2Q6ZN30 1099 aaPredicted RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 STOX1Q6ZVD7 989 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 ZNF567Q8N184 647 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 MSL3Q8N5Y2 521 aaKnown RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 DLG3Q92796 817 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 EXOSC8Q96B26 276 aaKnown RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 ZDHHC12Q96GR4 267 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 TEFMQ96QE5 360 aaKnown RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 PAPOLGQ9BWT3 736 aaKnown RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 NELFAQ9H3P2 528 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 WDR26Q9H7D7 661 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 KCNN3Q9UGI6 736 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 C3orf18Q9UK00 162 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 AP4S1Q9Y587 144 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 GPR75-ASB3A0A0A6YYF3 556 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 AOC2O75106 756 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 PGRP06401 933 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 HOXB8P17481 243 aaPredicted RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 S100A7P31151 101 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 RPL22P35268 128 aaKnown RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 SLC6A3Q01959 620 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 SLC14A2Q15849 920 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 JPH3Q8WXH2 748 aaPredicted RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 MAP4K1Q92918 833 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CD101Q93033 1021 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 ELMO3Q96BJ8 720 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 MFSD14AQ96MC6 490 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CDH20Q9HBT6 801 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 GPRC5CQ9NQ84 441 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 ASB3Q9Y575 518 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 DUX1O43812 170 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 VAPBO95292 243 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CORO1AP31146 461 aaKnown RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 ZNF84P51523 738 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 ZNF135P52742 658 aaPredicted RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 CLRN1P58418 232 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 CD47Q08722 323 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 MALLQ13021 153 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 KCTD19Q17RG1 926 aaPredicted RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 ANKRD23Q86SG2 305 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 LINC00301Q8NCQ3 95 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 POC1BQ8TC44 478 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms